Analysis of interatomic Contacts of Structural Units in PDB entry:
7VH5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7VH5 entry

There are 6 chains in PDB entry 7VH5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 110	THR 918
B	GLU 110	THR 918
C	GLU 110	THR 918
D	GLU 110	THR 918
E	GLU 110	THR 918
F	GLU 110	THR 918

There are180 helices in PDB entry 7VH5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	110	121	Right-handed alpha
Helix 2	AA2	A	122	138	Right-handed alpha
Helix 3	AA3	A	140	174	Right-handed alpha
Helix 4	AA4	A	194	196	Right-handed 310
Helix 5	AA5	A	267	280	Right-handed alpha
Helix 6	AA6	A	284	315	Right-handed alpha
Helix 7	AA7	A	318	334	Right-handed alpha
Helix 8	AA8	A	337	356	Right-handed alpha
Helix 9	AA9	A	363	371	Right-handed alpha
Helix 10	AB1	A	400	411	Right-handed alpha
Helix 11	AB2	A	415	419	Right-handed 310
Helix 12	AB3	A	420	428	Right-handed alpha
Helix 13	AB4	A	476	482	Right-handed alpha
Helix 14	AB5	A	490	508	Right-handed alpha
Helix 15	AB6	A	539	550	Right-handed alpha
Helix 16	AB7	A	561	573	Right-handed alpha
Helix 17	AB8	A	581	585	Right-handed alpha
Helix 18	AB9	A	593	604	Right-handed alpha
Helix 19	AC1	A	611	625	Right-handed alpha
Helix 20	AC2	A	638	645	Right-handed alpha
Helix 21	AC3	A	655	662	Right-handed alpha
Helix 22	AC4	A	670	714	Right-handed alpha
Helix 23	AC5	A	718	737	Right-handed alpha
Helix 24	AC6	A	751	777	Right-handed alpha
Helix 25	AC7	A	790	805	Right-handed alpha
Helix 26	AC8	A	805	811	Right-handed alpha
Helix 27	AC9	A	822	843	Right-handed alpha
Helix 28	AD1	A	851	878	Right-handed alpha
Helix 29	AD2	A	879	888	Right-handed alpha
Helix 30	AD3	A	896	917	Right-handed alpha
Helix 31	AD4	B	111	121	Right-handed alpha
Helix 32	AD5	B	122	138	Right-handed alpha
Helix 33	AD6	B	140	174	Right-handed alpha
Helix 34	AD7	B	194	196	Right-handed 310
Helix 35	AD8	B	267	280	Right-handed alpha
Helix 36	AD9	B	284	315	Right-handed alpha
Helix 37	AE1	B	318	334	Right-handed alpha
Helix 38	AE2	B	337	356	Right-handed alpha
Helix 39	AE3	B	363	371	Right-handed alpha
Helix 40	AE4	B	400	411	Right-handed alpha
Helix 41	AE5	B	415	419	Right-handed 310
Helix 42	AE6	B	420	428	Right-handed alpha
Helix 43	AE7	B	476	482	Right-handed alpha
Helix 44	AE8	B	490	508	Right-handed alpha
Helix 45	AE9	B	539	550	Right-handed alpha
Helix 46	AF1	B	561	573	Right-handed alpha
Helix 47	AF2	B	581	585	Right-handed alpha
Helix 48	AF3	B	593	604	Right-handed alpha
Helix 49	AF4	B	611	625	Right-handed alpha
Helix 50	AF5	B	638	645	Right-handed alpha
Helix 51	AF6	B	655	662	Right-handed alpha
Helix 52	AF7	B	670	714	Right-handed alpha
Helix 53	AF8	B	718	737	Right-handed alpha
Helix 54	AF9	B	751	777	Right-handed alpha
Helix 55	AG1	B	790	805	Right-handed alpha
Helix 56	AG2	B	805	811	Right-handed alpha
Helix 57	AG3	B	822	843	Right-handed alpha
Helix 58	AG4	B	851	878	Right-handed alpha
Helix 59	AG5	B	879	888	Right-handed alpha
Helix 60	AG6	B	896	917	Right-handed alpha
Helix 61	AG7	C	111	121	Right-handed alpha
Helix 62	AG8	C	122	138	Right-handed alpha
Helix 63	AG9	C	140	174	Right-handed alpha
Helix 64	AH1	C	194	196	Right-handed 310
Helix 65	AH2	C	267	280	Right-handed alpha
Helix 66	AH3	C	284	315	Right-handed alpha
Helix 67	AH4	C	318	334	Right-handed alpha
Helix 68	AH5	C	337	356	Right-handed alpha
Helix 69	AH6	C	363	371	Right-handed alpha
Helix 70	AH7	C	400	411	Right-handed alpha
Helix 71	AH8	C	415	419	Right-handed 310
Helix 72	AH9	C	420	428	Right-handed alpha
Helix 73	AI1	C	476	482	Right-handed alpha
Helix 74	AI2	C	490	508	Right-handed alpha
Helix 75	AI3	C	539	550	Right-handed alpha
Helix 76	AI4	C	561	573	Right-handed alpha
Helix 77	AI5	C	581	585	Right-handed alpha
Helix 78	AI6	C	593	604	Right-handed alpha
Helix 79	AI7	C	611	625	Right-handed alpha
Helix 80	AI8	C	638	645	Right-handed alpha
Helix 81	AI9	C	655	662	Right-handed alpha
Helix 82	AJ1	C	670	714	Right-handed alpha
Helix 83	AJ2	C	718	737	Right-handed alpha
Helix 84	AJ3	C	751	777	Right-handed alpha
Helix 85	AJ4	C	790	805	Right-handed alpha
Helix 86	AJ5	C	805	811	Right-handed alpha
Helix 87	AJ6	C	822	843	Right-handed alpha
Helix 88	AJ7	C	851	878	Right-handed alpha
Helix 89	AJ8	C	879	888	Right-handed alpha
Helix 90	AJ9	C	896	917	Right-handed alpha
Helix 91	AK1	D	111	121	Right-handed alpha
Helix 92	AK2	D	122	138	Right-handed alpha
Helix 93	AK3	D	140	174	Right-handed alpha
Helix 94	AK4	D	194	196	Right-handed 310
Helix 95	AK5	D	267	280	Right-handed alpha
Helix 96	AK6	D	284	315	Right-handed alpha
Helix 97	AK7	D	318	334	Right-handed alpha
Helix 98	AK8	D	337	356	Right-handed alpha
Helix 99	AK9	D	363	371	Right-handed alpha
Helix 100	AL1	D	400	411	Right-handed alpha
Helix 101	AL2	D	415	419	Right-handed 310
Helix 102	AL3	D	420	428	Right-handed alpha
Helix 103	AL4	D	476	482	Right-handed alpha
Helix 104	AL5	D	490	508	Right-handed alpha
Helix 105	AL6	D	539	550	Right-handed alpha
Helix 106	AL7	D	561	573	Right-handed alpha
Helix 107	AL8	D	581	585	Right-handed alpha
Helix 108	AL9	D	593	604	Right-handed alpha
Helix 109	AM1	D	611	625	Right-handed alpha
Helix 110	AM2	D	638	645	Right-handed alpha
Helix 111	AM3	D	655	662	Right-handed alpha
Helix 112	AM4	D	670	714	Right-handed alpha
Helix 113	AM5	D	718	737	Right-handed alpha
Helix 114	AM6	D	751	777	Right-handed alpha
Helix 115	AM7	D	790	805	Right-handed alpha
Helix 116	AM8	D	805	811	Right-handed alpha
Helix 117	AM9	D	822	843	Right-handed alpha
Helix 118	AN1	D	851	878	Right-handed alpha
Helix 119	AN2	D	879	888	Right-handed alpha
Helix 120	AN3	D	896	917	Right-handed alpha
Helix 121	AN4	E	111	121	Right-handed alpha
Helix 122	AN5	E	122	138	Right-handed alpha
Helix 123	AN6	E	140	174	Right-handed alpha
Helix 124	AN7	E	194	196	Right-handed 310
Helix 125	AN8	E	267	280	Right-handed alpha
Helix 126	AN9	E	284	315	Right-handed alpha
Helix 127	AO1	E	318	334	Right-handed alpha
Helix 128	AO2	E	337	356	Right-handed alpha
Helix 129	AO3	E	363	371	Right-handed alpha
Helix 130	AO4	E	400	411	Right-handed alpha
Helix 131	AO5	E	415	419	Right-handed 310
Helix 132	AO6	E	420	428	Right-handed alpha
Helix 133	AO7	E	476	482	Right-handed alpha
Helix 134	AO8	E	490	508	Right-handed alpha
Helix 135	AO9	E	539	550	Right-handed alpha
Helix 136	AP1	E	561	573	Right-handed alpha
Helix 137	AP2	E	581	585	Right-handed alpha
Helix 138	AP3	E	593	604	Right-handed alpha
Helix 139	AP4	E	611	625	Right-handed alpha
Helix 140	AP5	E	638	645	Right-handed alpha
Helix 141	AP6	E	655	662	Right-handed alpha
Helix 142	AP7	E	670	714	Right-handed alpha
Helix 143	AP8	E	718	737	Right-handed alpha
Helix 144	AP9	E	751	777	Right-handed alpha
Helix 145	AQ1	E	790	805	Right-handed alpha
Helix 146	AQ2	E	805	811	Right-handed alpha
Helix 147	AQ3	E	822	843	Right-handed alpha
Helix 148	AQ4	E	851	878	Right-handed alpha
Helix 149	AQ5	E	879	888	Right-handed alpha
Helix 150	AQ6	E	896	917	Right-handed alpha
Helix 151	AQ7	F	111	121	Right-handed alpha
Helix 152	AQ8	F	122	138	Right-handed alpha
Helix 153	AQ9	F	140	174	Right-handed alpha
Helix 154	AR1	F	194	196	Right-handed 310
Helix 155	AR2	F	267	280	Right-handed alpha
Helix 156	AR3	F	284	315	Right-handed alpha
Helix 157	AR4	F	318	334	Right-handed alpha
Helix 158	AR5	F	337	356	Right-handed alpha
Helix 159	AR6	F	363	371	Right-handed alpha
Helix 160	AR7	F	400	411	Right-handed alpha
Helix 161	AR8	F	415	419	Right-handed 310
Helix 162	AR9	F	420	428	Right-handed alpha
Helix 163	AS1	F	476	482	Right-handed alpha
Helix 164	AS2	F	490	508	Right-handed alpha
Helix 165	AS3	F	539	550	Right-handed alpha
Helix 166	AS4	F	561	573	Right-handed alpha
Helix 167	AS5	F	581	585	Right-handed alpha
Helix 168	AS6	F	593	604	Right-handed alpha
Helix 169	AS7	F	611	625	Right-handed alpha
Helix 170	AS8	F	638	645	Right-handed alpha
Helix 171	AS9	F	655	662	Right-handed alpha
Helix 172	AT1	F	670	714	Right-handed alpha
Helix 173	AT2	F	718	737	Right-handed alpha
Helix 174	AT3	F	751	777	Right-handed alpha
Helix 175	AT4	F	790	805	Right-handed alpha
Helix 176	AT5	F	805	811	Right-handed alpha
Helix 177	AT6	F	822	843	Right-handed alpha
Helix 178	AT7	F	851	878	Right-handed alpha
Helix 179	AT8	F	879	888	Right-handed alpha
Helix 180	AT9	F	896	917	Right-handed alpha

There are 24 sheets in PDB entry 7VH5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	192	first strand
Strand 2	A	179	184	anti-parallel
Strand 3	A	200	204	anti-parallel
Strand 4	A	256	260	anti-parallel
Strand 5	A	214	216	anti-parallel
Strand 6	A	244	245	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	239	first strand
Strand 2	A	223	226	anti-parallel
Strand 3	A	250	253	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	360	first strand
Strand 2	A	664	666	anti-parallel
Strand 3	A	647	650	parallel
Strand 4	A	629	633	parallel
Strand 5	A	374	378	parallel
Strand 6	A	553	557	parallel
Strand 7	A	606	608	parallel
Strand 8	A	578	580	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	390	first strand
Strand 2	A	524	533	anti-parallel
Strand 3	A	511	518	anti-parallel
Strand 4	A	469	475	anti-parallel
Strand 5	A	457	463	anti-parallel
Strand 6	A	445	449	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	179	184	anti-parallel
Strand 3	B	200	204	anti-parallel
Strand 4	B	256	260	anti-parallel
Strand 5	B	214	216	anti-parallel
Strand 6	B	244	245	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	239	first strand
Strand 2	B	223	226	anti-parallel
Strand 3	B	250	253	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	360	first strand
Strand 2	B	664	666	anti-parallel
Strand 3	B	647	650	parallel
Strand 4	B	629	633	parallel
Strand 5	B	374	378	parallel
Strand 6	B	553	557	parallel
Strand 7	B	606	608	parallel
Strand 8	B	578	580	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	390	first strand
Strand 2	B	524	533	anti-parallel
Strand 3	B	511	518	anti-parallel
Strand 4	B	469	475	anti-parallel
Strand 5	B	457	463	anti-parallel
Strand 6	B	445	449	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	192	first strand
Strand 2	C	179	184	anti-parallel
Strand 3	C	200	204	anti-parallel
Strand 4	C	256	260	anti-parallel
Strand 5	C	214	216	anti-parallel
Strand 6	C	244	245	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	239	first strand
Strand 2	C	223	226	anti-parallel
Strand 3	C	250	253	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	360	first strand
Strand 2	C	664	666	anti-parallel
Strand 3	C	647	650	parallel
Strand 4	C	629	633	parallel
Strand 5	C	374	378	parallel
Strand 6	C	553	557	parallel
Strand 7	C	606	608	parallel
Strand 8	C	578	580	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	389	390	first strand
Strand 2	C	524	533	anti-parallel
Strand 3	C	511	518	anti-parallel
Strand 4	C	469	475	anti-parallel
Strand 5	C	457	463	anti-parallel
Strand 6	C	445	449	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	187	192	first strand
Strand 2	D	179	184	anti-parallel
Strand 3	D	200	204	anti-parallel
Strand 4	D	256	260	anti-parallel
Strand 5	D	214	216	anti-parallel
Strand 6	D	244	245	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	237	239	first strand
Strand 2	D	223	226	anti-parallel
Strand 3	D	250	253	anti-parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	358	360	first strand
Strand 2	D	664	666	anti-parallel
Strand 3	D	647	650	parallel
Strand 4	D	629	633	parallel
Strand 5	D	374	378	parallel
Strand 6	D	553	557	parallel
Strand 7	D	606	608	parallel
Strand 8	D	578	580	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	389	390	first strand
Strand 2	D	524	533	anti-parallel
Strand 3	D	511	518	anti-parallel
Strand 4	D	469	475	anti-parallel
Strand 5	D	457	463	anti-parallel
Strand 6	D	445	449	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	187	192	first strand
Strand 2	E	179	184	anti-parallel
Strand 3	E	200	204	anti-parallel
Strand 4	E	256	260	anti-parallel
Strand 5	E	214	216	anti-parallel
Strand 6	E	244	245	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	237	239	first strand
Strand 2	E	223	226	anti-parallel
Strand 3	E	250	253	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	358	360	first strand
Strand 2	E	664	666	anti-parallel
Strand 3	E	647	650	parallel
Strand 4	E	629	633	parallel
Strand 5	E	374	378	parallel
Strand 6	E	553	557	parallel
Strand 7	E	606	608	parallel
Strand 8	E	578	580	parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	389	390	first strand
Strand 2	E	524	533	anti-parallel
Strand 3	E	511	518	anti-parallel
Strand 4	E	469	475	anti-parallel
Strand 5	E	457	463	anti-parallel
Strand 6	E	445	449	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	187	192	first strand
Strand 2	F	179	184	anti-parallel
Strand 3	F	200	204	anti-parallel
Strand 4	F	256	260	anti-parallel
Strand 5	F	214	216	anti-parallel
Strand 6	F	244	245	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	237	239	first strand
Strand 2	F	223	226	anti-parallel
Strand 3	F	250	253	anti-parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	358	360	first strand
Strand 2	F	664	666	anti-parallel
Strand 3	F	647	650	parallel
Strand 4	F	629	633	parallel
Strand 5	F	374	378	parallel
Strand 6	F	553	557	parallel
Strand 7	F	606	608	parallel
Strand 8	F	578	580	parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	389	390	first strand
Strand 2	F	524	533	anti-parallel
Strand 3	F	511	518	anti-parallel
Strand 4	F	469	475	anti-parallel
Strand 5	F	457	463	anti-parallel
Strand 6	F	445	449	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7VH5

Analysis of interatomic Contacts of Structural Units in PDB entry:
7VH5