Analysis of interatomic Contacts of Structural Units in PDB entry:
7VHK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7VHK entry

There are 3 chains in PDB entry 7VHK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ALA 27	SER 1140
A	ALA 27	SER 1140
C	ALA 27	SER 1140

There are 63 helices in PDB entry 7VHK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	294	304	Right-handed alpha
Helix 2	AA2	B	338	343	Right-handed alpha
Helix 3	AA3	B	349	353	Right-handed 310
Helix 4	AA4	B	366	371	Right-handed alpha
Helix 5	AA5	B	383	388	Right-handed alpha
Helix 6	AA6	B	438	443	Right-handed alpha
Helix 7	AA7	B	502	506	Right-handed 310
Helix 8	AA8	B	730	735	Right-handed alpha
Helix 9	AA9	B	740	750	Right-handed alpha
Helix 10	AB1	B	751	775	Right-handed alpha
Helix 11	AB2	B	809	814	Right-handed alpha
Helix 12	AB3	B	842	849	Right-handed alpha
Helix 13	AB4	B	859	876	Right-handed alpha
Helix 14	AB5	B	879	884	Right-handed alpha
Helix 15	AB6	B	890	902	Right-handed alpha
Helix 16	AB7	B	905	912	Right-handed alpha
Helix 17	AB8	B	912	932	Right-handed alpha
Helix 18	AB9	B	933	939	Right-handed 310
Helix 19	AC1	B	940	957	Right-handed alpha
Helix 20	AC2	B	978	1025	Right-handed alpha
Helix 21	AC3	B	1134	1140	Right-handed alpha
Helix 22	AC4	A	294	304	Right-handed alpha
Helix 23	AC5	A	338	343	Right-handed alpha
Helix 24	AC6	A	349	353	Right-handed 310
Helix 25	AC7	A	366	371	Right-handed alpha
Helix 26	AC8	A	383	388	Right-handed alpha
Helix 27	AC9	A	438	443	Right-handed alpha
Helix 28	AD1	A	502	506	Right-handed 310
Helix 29	AD2	A	730	735	Right-handed alpha
Helix 30	AD3	A	740	750	Right-handed alpha
Helix 31	AD4	A	751	775	Right-handed alpha
Helix 32	AD5	A	809	814	Right-handed alpha
Helix 33	AD6	A	842	849	Right-handed alpha
Helix 34	AD7	A	859	876	Right-handed alpha
Helix 35	AD8	A	879	884	Right-handed alpha
Helix 36	AD9	A	890	902	Right-handed alpha
Helix 37	AE1	A	905	912	Right-handed alpha
Helix 38	AE2	A	912	932	Right-handed alpha
Helix 39	AE3	A	933	939	Right-handed 310
Helix 40	AE4	A	940	957	Right-handed alpha
Helix 41	AE5	A	978	1025	Right-handed alpha
Helix 42	AE6	A	1134	1140	Right-handed alpha
Helix 43	AE7	C	294	304	Right-handed alpha
Helix 44	AE8	C	338	343	Right-handed alpha
Helix 45	AE9	C	349	353	Right-handed 310
Helix 46	AF1	C	366	371	Right-handed alpha
Helix 47	AF2	C	383	388	Right-handed alpha
Helix 48	AF3	C	438	443	Right-handed alpha
Helix 49	AF4	C	502	506	Right-handed 310
Helix 50	AF5	C	730	735	Right-handed alpha
Helix 51	AF6	C	740	750	Right-handed alpha
Helix 52	AF7	C	751	775	Right-handed alpha
Helix 53	AF8	C	809	814	Right-handed alpha
Helix 54	AF9	C	842	849	Right-handed alpha
Helix 55	AG1	C	859	876	Right-handed alpha
Helix 56	AG2	C	879	884	Right-handed alpha
Helix 57	AG3	C	890	902	Right-handed alpha
Helix 58	AG4	C	905	912	Right-handed alpha
Helix 59	AG5	C	912	932	Right-handed alpha
Helix 60	AG6	C	933	939	Right-handed 310
Helix 61	AG7	C	940	957	Right-handed alpha
Helix 62	AG8	C	978	1025	Right-handed alpha
Helix 63	AG9	C	1134	1140	Right-handed alpha

There are 54 sheets in PDB entry 7VHK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	61	63	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	51	first strand
Strand 2	B	275	278	anti-parallel
Strand 3	B	287	289	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	271	272	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	230	first strand
Strand 2	B	200	209	anti-parallel
Strand 3	B	188	196	anti-parallel
Strand 4	B	89	96	anti-parallel
Strand 5	B	264	268	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	107	first strand
Strand 2	B	237	243	anti-parallel
Strand 3	B	140	141	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	119	first strand
Strand 2	B	127	129	anti-parallel
Strand 3	B	170	171	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	313	first strand
Strand 2	B	597	599	anti-parallel
Strand 3	B	609	611	anti-parallel
Strand 4	B	650	651	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	358	first strand
Strand 2	B	395	402	anti-parallel
Strand 3	B	508	513	anti-parallel
Strand 4	B	432	437	anti-parallel
Strand 5	B	376	379	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	539	540	first strand
Strand 2	B	549	553	anti-parallel
Strand 3	B	584	589	anti-parallel
Strand 4	B	575	577	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	656	first strand
Strand 2	B	684	689	parallel
Strand 3	B	670	675	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	704	706	first strand
Strand 2	B	1067	1069	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	710	721	first strand
Strand 2	B	1052	1064	anti-parallel
Strand 3	B	1040	1043	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	710	721	first strand
Strand 2	B	1052	1064	anti-parallel
Strand 3	B	1047	1049	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	727	729	first strand
Strand 2	B	851	853	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1074	1075	first strand
Strand 2	B	1126	1127	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1079	1083	first strand
Strand 2	B	1113	1118	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1087	1089	first strand
Strand 2	B	1096	1098	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	61	63	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	51	first strand
Strand 2	A	275	278	anti-parallel
Strand 3	A	287	289	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	271	272	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	230	first strand
Strand 2	A	200	209	anti-parallel
Strand 3	A	188	196	anti-parallel
Strand 4	A	89	96	anti-parallel
Strand 5	A	264	268	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	107	first strand
Strand 2	A	237	243	anti-parallel
Strand 3	A	140	141	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	119	first strand
Strand 2	A	127	129	anti-parallel
Strand 3	A	170	171	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	313	first strand
Strand 2	A	597	599	anti-parallel
Strand 3	A	609	611	anti-parallel
Strand 4	A	650	651	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	395	402	anti-parallel
Strand 3	A	508	513	anti-parallel
Strand 4	A	432	437	anti-parallel
Strand 5	A	376	379	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	539	540	first strand
Strand 2	A	549	553	anti-parallel
Strand 3	A	584	589	anti-parallel
Strand 4	A	575	577	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	656	first strand
Strand 2	A	684	689	parallel
Strand 3	A	670	675	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	704	706	first strand
Strand 2	A	1067	1069	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	710	721	first strand
Strand 2	A	1052	1064	anti-parallel
Strand 3	A	1040	1043	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	710	721	first strand
Strand 2	A	1052	1064	anti-parallel
Strand 3	A	1047	1049	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	727	729	first strand
Strand 2	A	851	853	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1074	1075	first strand
Strand 2	A	1126	1127	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1079	1083	first strand
Strand 2	A	1113	1118	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1087	1089	first strand
Strand 2	A	1096	1098	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	30	first strand
Strand 2	C	61	63	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	51	first strand
Strand 2	C	275	278	anti-parallel
Strand 3	C	287	289	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	271	272	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	230	first strand
Strand 2	C	200	209	anti-parallel
Strand 3	C	188	196	anti-parallel
Strand 4	C	89	96	anti-parallel
Strand 5	C	264	268	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	107	first strand
Strand 2	C	237	243	anti-parallel
Strand 3	C	140	141	parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	119	first strand
Strand 2	C	127	129	anti-parallel
Strand 3	C	170	171	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	313	first strand
Strand 2	C	597	599	anti-parallel
Strand 3	C	609	611	anti-parallel
Strand 4	C	650	651	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	356	358	first strand
Strand 2	C	395	402	anti-parallel
Strand 3	C	508	513	anti-parallel
Strand 4	C	432	437	anti-parallel
Strand 5	C	376	379	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	539	540	first strand
Strand 2	C	549	553	anti-parallel
Strand 3	C	584	589	anti-parallel
Strand 4	C	575	577	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	656	first strand
Strand 2	C	684	689	parallel
Strand 3	C	670	675	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	704	706	first strand
Strand 2	C	1067	1069	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	710	721	first strand
Strand 2	C	1052	1064	anti-parallel
Strand 3	C	1040	1043	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	710	721	first strand
Strand 2	C	1052	1064	anti-parallel
Strand 3	C	1047	1049	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	727	729	first strand
Strand 2	C	851	853	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1074	1075	first strand
Strand 2	C	1126	1127	parallel

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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1079	1083	first strand
Strand 2	C	1113	1118	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1087	1089	first strand
Strand 2	C	1096	1098	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7VHK

Analysis of interatomic Contacts of Structural Units in PDB entry:
7VHK