Analysis of interatomic Contacts of Structural Units in PDB entry:
7VI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VI6 entry

There are 2 chains in PDB entry 7VI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 342
B
 MET 1GLU 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7VI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
32 36Right-handed 310
Helix 3
AA3
A
38 53Right-handed alpha
Helix 4
AA4
A
71 75Right-handed 310
Helix 5
AA5
A
80 88Right-handed alpha
Helix 6
AA6
A
89 108Right-handed alpha
Helix 7
AA7
A
137 155Right-handed alpha
Helix 8
AA8
A
166 170Right-handed 310
Helix 9
AA9
A
184 191Right-handed alpha
Helix 10
AB1
A
193 199Right-handed alpha
Helix 11
AB2
A
200 203Right-handed 310
Helix 12
AB3
A
221 224Right-handed 310
Helix 13
AB4
A
225 230Right-handed alpha
Helix 14
AB5
A
251 256Right-handed 310
Helix 15
AB6
A
258 270Right-handed alpha
Helix 16
AB7
A
280 291Right-handed alpha
Helix 17
AB8
A
292 294Right-handed 310
Helix 18
AB9
A
295 313Right-handed alpha
Helix 19
AC1
A
320 342Right-handed alpha
Helix 20
AC2
B
14 25Right-handed alpha
Helix 21
AC3
B
32 36Right-handed 310
Helix 22
AC4
B
38 53Right-handed alpha
Helix 23
AC5
B
71 75Right-handed 310
Helix 24
AC6
B
80 88Right-handed alpha
Helix 25
AC7
B
89 108Right-handed alpha
Helix 26
AC8
B
137 155Right-handed alpha
Helix 27
AC9
B
166 170Right-handed 310
Helix 28
AD1
B
184 191Right-handed alpha
Helix 29
AD2
B
193 199Right-handed alpha
Helix 30
AD3
B
200 203Right-handed 310
Helix 31
AD4
B
221 224Right-handed 310
Helix 32
AD5
B
225 230Right-handed alpha
Helix 33
AD6
B
252 257Right-handed alpha
Helix 34
AD7
B
258 270Right-handed alpha
Helix 35
AD8
B
280 291Right-handed alpha
Helix 36
AD9
B
292 294Right-handed 310
Helix 37
AE1
B
295 313Right-handed alpha
Helix 38
AE2
B
320 343Right-handed alpha
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There are 2 sheets in PDB entry 7VI6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
58 61parallel
Strand 3
A
26 31parallel
Strand 4
A
2 7parallel
Strand 5
A
273 276parallel
Strand 6
A
242 247parallel
Strand 7
A
205 208parallel
Strand 8
A
160 164parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
58 61parallel
Strand 3
B
26 30parallel
Strand 4
B
2 7parallel
Strand 5
B
273 276parallel
Strand 6
B
242 247parallel
Strand 7
B
205 208parallel
Strand 8
B
160 164parallel
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