Analysis of interatomic Contacts of Structural Units in PDB entry:
7VI9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7VI9 entry

There are 7 chains in PDB entry 7VI9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 7	ALA 341
B	ALA 7	ALA 341
C	ALA 7	ALA 341
D	ALA 7	ALA 341
E	ALA 7	ALA 341
F	ALA 7	ALA 341
G	ALA 7	ALA 341

There are 70 helices in PDB entry 7VI9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	44	Right-handed 310
Helix 2	AA2	A	97	102	Right-handed 310
Helix 3	AA3	A	103	138	Right-handed alpha
Helix 4	AA4	A	157	161	Right-handed 310
Helix 5	AA5	A	180	190	Right-handed alpha
Helix 6	AA6	A	211	218	Right-handed alpha
Helix 7	AA7	A	227	235	Right-handed alpha
Helix 8	AA8	A	292	297	Right-handed 310
Helix 9	AA9	A	331	335	Right-handed 310
Helix 10	AB1	B	98	102	Right-handed 310
Helix 11	AB2	B	103	138	Right-handed alpha
Helix 12	AB3	B	157	161	Right-handed 310
Helix 13	AB4	B	180	189	Right-handed alpha
Helix 14	AB5	B	190	192	Right-handed 310
Helix 15	AB6	B	203	210	Right-handed alpha
Helix 16	AB7	B	211	218	Right-handed alpha
Helix 17	AB8	B	227	235	Right-handed alpha
Helix 18	AB9	B	290	296	Right-handed alpha
Helix 19	AC1	B	331	335	Right-handed 310
Helix 20	AC2	C	42	44	Right-handed 310
Helix 21	AC3	C	99	102	Right-handed 310
Helix 22	AC4	C	103	138	Right-handed alpha
Helix 23	AC5	C	158	162	Right-handed 310
Helix 24	AC6	C	179	189	Right-handed alpha
Helix 25	AC7	C	201	211	Right-handed alpha
Helix 26	AC8	C	211	216	Right-handed alpha
Helix 27	AC9	C	227	233	Right-handed alpha
Helix 28	AD1	C	234	236	Right-handed 310
Helix 29	AD2	C	290	296	Right-handed alpha
Helix 30	AD3	C	331	335	Right-handed 310
Helix 31	AD4	D	42	44	Right-handed 310
Helix 32	AD5	D	98	102	Right-handed 310
Helix 33	AD6	D	103	138	Right-handed alpha
Helix 34	AD7	D	157	161	Right-handed 310
Helix 35	AD8	D	180	189	Right-handed alpha
Helix 36	AD9	D	190	192	Right-handed 310
Helix 37	AE1	D	203	209	Right-handed alpha
Helix 38	AE2	D	211	218	Right-handed alpha
Helix 39	AE3	D	227	233	Right-handed alpha
Helix 40	AE4	D	290	297	Right-handed alpha
Helix 41	AE5	D	331	335	Right-handed 310
Helix 42	AE6	E	40	44	Right-handed 310
Helix 43	AE7	E	97	102	Right-handed 310
Helix 44	AE8	E	103	138	Right-handed alpha
Helix 45	AE9	E	157	161	Right-handed 310
Helix 46	AF1	E	180	189	Right-handed alpha
Helix 47	AF2	E	190	192	Right-handed 310
Helix 48	AF3	E	201	211	Right-handed alpha
Helix 49	AF4	E	211	218	Right-handed alpha
Helix 50	AF5	E	228	235	Right-handed alpha
Helix 51	AF6	E	290	297	Right-handed alpha
Helix 52	AF7	F	42	44	Right-handed 310
Helix 53	AF8	F	99	102	Right-handed 310
Helix 54	AF9	F	103	138	Right-handed alpha
Helix 55	AG1	F	157	161	Right-handed 310
Helix 56	AG2	F	180	189	Right-handed alpha
Helix 57	AG3	F	201	210	Right-handed alpha
Helix 58	AG4	F	211	218	Right-handed alpha
Helix 59	AG5	F	228	233	Right-handed alpha
Helix 60	AG6	F	290	296	Right-handed alpha
Helix 61	AG7	G	40	44	Right-handed 310
Helix 62	AG8	G	98	102	Right-handed 310
Helix 63	AG9	G	103	138	Right-handed alpha
Helix 64	AH1	G	157	162	Right-handed 310
Helix 65	AH2	G	180	190	Right-handed alpha
Helix 66	AH3	G	201	211	Right-handed alpha
Helix 67	AH4	G	211	218	Right-handed alpha
Helix 68	AH5	G	227	233	Right-handed alpha
Helix 69	AH6	G	290	297	Right-handed alpha
Helix 70	AH7	G	331	335	Right-handed 310

There are 49 sheets in PDB entry 7VI9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	33	first strand
Strand 2	A	281	285	parallel
Strand 3	A	328	329	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	40	first strand
Strand 2	A	72	73	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	83	first strand
Strand 2	A	317	323	anti-parallel
Strand 3	A	303	309	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	139	144	first strand
Strand 2	A	147	153	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	244	first strand
Strand 2	A	249	253	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	258	first strand
Strand 2	A	263	265	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	274	first strand
Strand 2	A	336	339	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	284	285	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	40	first strand
Strand 2	B	72	73	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	83	first strand
Strand 2	B	316	322	anti-parallel
Strand 3	B	304	310	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	142	first strand
Strand 2	B	150	153	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	244	first strand
Strand 2	B	249	253	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	258	first strand
Strand 2	B	263	265	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	274	first strand
Strand 2	B	336	339	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	281	282	first strand
Strand 2	B	328	329	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	40	first strand
Strand 2	C	72	73	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	83	first strand
Strand 2	C	317	321	anti-parallel
Strand 3	C	305	309	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	139	142	first strand
Strand 2	C	150	153	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	239	244	first strand
Strand 2	C	249	253	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	258	first strand
Strand 2	C	263	265	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	274	first strand
Strand 2	C	336	339	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	281	282	first strand
Strand 2	C	328	329	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	33	first strand
Strand 2	D	281	285	parallel
Strand 3	D	328	329	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	40	first strand
Strand 2	D	72	73	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	139	142	first strand
Strand 2	D	150	153	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	239	245	first strand
Strand 2	D	248	253	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	256	258	first strand
Strand 2	D	263	265	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	271	274	first strand
Strand 2	D	336	339	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	305	310	first strand
Strand 2	D	316	321	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	33	first strand
Strand 2	E	284	285	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	139	144	first strand
Strand 2	E	147	153	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	239	244	first strand
Strand 2	E	249	253	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	256	258	first strand
Strand 2	E	263	265	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	271	275	first strand
Strand 2	E	335	339	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	281	282	first strand
Strand 2	E	328	329	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	303	309	first strand
Strand 2	E	317	323	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	39	40	first strand
Strand 2	F	72	73	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	81	83	first strand
Strand 2	F	317	322	anti-parallel
Strand 3	F	304	309	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	139	142	first strand
Strand 2	F	150	153	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	243	244	first strand
Strand 2	F	249	250	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	256	258	first strand
Strand 2	F	263	265	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	271	274	first strand
Strand 2	F	336	339	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	281	282	first strand
Strand 2	F	328	329	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	81	83	first strand
Strand 2	G	317	321	anti-parallel
Strand 3	G	305	309	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	140	144	first strand
Strand 2	G	147	152	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	239	244	first strand
Strand 2	G	249	253	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	256	258	first strand
Strand 2	G	263	265	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	271	274	first strand
Strand 2	G	336	339	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	281	282	first strand
Strand 2	G	328	329	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7VI9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7VI9