Analysis of interatomic Contacts of Structural Units in PDB entry:
7VLB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VLB entry

There are 2 chains in PDB entry 7VLB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 4SER 388
B
 HIS 4SER 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7VLB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 30Right-handed alpha
Helix 2
AA2
A
39 41Right-handed 310
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
63 69Right-handed alpha
Helix 5
AA5
A
77 96Right-handed alpha
Helix 6
AA6
A
109 119Right-handed alpha
Helix 7
AA7
A
149 155Right-handed alpha
Helix 8
AA8
A
189 193Right-handed 310
Helix 9
AA9
A
234 246Right-handed alpha
Helix 10
AB1
A
279 285Right-handed alpha
Helix 11
AB2
A
295 304Right-handed alpha
Helix 12
AB3
A
315 328Right-handed alpha
Helix 13
AB4
A
340 352Right-handed alpha
Helix 14
AB5
A
354 371Right-handed alpha
Helix 15
AB6
A
373 388Right-handed alpha
Helix 16
AB7
B
19 29Right-handed alpha
Helix 17
AB8
B
39 41Right-handed 310
Helix 18
AB9
B
42 50Right-handed alpha
Helix 19
AC1
B
82 96Right-handed alpha
Helix 20
AC2
B
112 116Right-handed alpha
Helix 21
AC3
B
117 119Right-handed 310
Helix 22
AC4
B
183 187Right-handed 310
Helix 23
AC5
B
189 193Right-handed 310
Helix 24
AC6
B
234 246Right-handed alpha
Helix 25
AC7
B
261 265Right-handed 310
Helix 26
AC8
B
279 285Right-handed alpha
Helix 27
AC9
B
295 305Right-handed alpha
Helix 28
AD1
B
315 328Right-handed alpha
Helix 29
AD2
B
340 352Right-handed alpha
Helix 30
AD3
B
355 371Right-handed alpha
Helix 31
AD4
B
372 386Right-handed alpha
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There are 4 sheets in PDB entry 7VLB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 55first strand
Strand 2
A
33 38parallel
Strand 3
A
5 9parallel
Strand 4
A
102 106parallel
Strand 5
A
123 127parallel
Strand 6
A
178 180parallel
Strand 7
A
197 199parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 275first strand
Strand 2
A
251 255parallel
Strand 3
A
222 225parallel
Strand 4
A
289 292parallel
Strand 5
A
309 311parallel
Strand 6
A
331 333parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 55first strand
Strand 2
B
33 38parallel
Strand 3
B
5 9parallel
Strand 4
B
102 106parallel
Strand 5
B
123 127parallel
Strand 6
B
178 180parallel
Strand 7
B
197 199parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 275first strand
Strand 2
B
251 255parallel
Strand 3
B
222 226parallel
Strand 4
B
289 292parallel
Strand 5
B
309 311parallel
Strand 6
B
331 333parallel
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