Analysis of interatomic Contacts of Structural Units in PDB entry:
7VNP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VNP entry

There are 8 chains in PDB entry 7VNP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 74ASP 584
B
 THR 6LYS 149
C
 SER 74ASP 584
D
 THR 6LYS 149
E
 SER 74ASP 584
F
 THR 6LYS 149
G
 SER 74ASP 584
H
 THR 6LYS 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 7VNP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 93Right-handed alpha
Helix 2
AA2
A
95 97Right-handed 310
Helix 3
AA3
A
98 121Right-handed alpha
Helix 4
AA4
A
125 153Right-handed alpha
Helix 5
AA5
A
161 172Right-handed alpha
Helix 6
AA6
A
172 191Right-handed alpha
Helix 7
AA7
A
201 216Right-handed alpha
Helix 8
AA8
A
222 234Right-handed alpha
Helix 9
AA9
A
234 261Right-handed alpha
Helix 10
AB1
A
269 282Right-handed alpha
Helix 11
AB2
A
293 312Right-handed alpha
Helix 12
AB3
A
312 356Right-handed alpha
Helix 13
AB4
A
529 552Right-handed alpha
Helix 14
AB5
A
559 584Right-handed alpha
Helix 15
AB6
B
7 20Right-handed alpha
Helix 16
AB7
B
29 41Right-handed alpha
Helix 17
AB8
B
45 56Right-handed alpha
Helix 18
AB9
B
67 73Right-handed alpha
Helix 19
AC1
B
79 94Right-handed alpha
Helix 20
AC2
B
102 113Right-handed alpha
Helix 21
AC3
B
118 129Right-handed alpha
Helix 22
AC4
B
138 148Right-handed alpha
Helix 23
AC5
C
75 93Right-handed alpha
Helix 24
AC6
C
95 97Right-handed 310
Helix 25
AC7
C
98 121Right-handed alpha
Helix 26
AC8
C
125 153Right-handed alpha
Helix 27
AC9
C
161 172Right-handed alpha
Helix 28
AD1
C
172 191Right-handed alpha
Helix 29
AD2
C
201 216Right-handed alpha
Helix 30
AD3
C
222 234Right-handed alpha
Helix 31
AD4
C
234 261Right-handed alpha
Helix 32
AD5
C
269 282Right-handed alpha
Helix 33
AD6
C
293 312Right-handed alpha
Helix 34
AD7
C
312 356Right-handed alpha
Helix 35
AD8
C
529 552Right-handed alpha
Helix 36
AD9
C
559 584Right-handed alpha
Helix 37
AE1
D
7 20Right-handed alpha
Helix 38
AE2
D
29 41Right-handed alpha
Helix 39
AE3
D
45 56Right-handed alpha
Helix 40
AE4
D
67 73Right-handed alpha
Helix 41
AE5
D
79 94Right-handed alpha
Helix 42
AE6
D
102 113Right-handed alpha
Helix 43
AE7
D
118 129Right-handed alpha
Helix 44
AE8
D
138 148Right-handed alpha
Helix 45
AE9
E
75 93Right-handed alpha
Helix 46
AF1
E
95 97Right-handed 310
Helix 47
AF2
E
98 121Right-handed alpha
Helix 48
AF3
E
125 153Right-handed alpha
Helix 49
AF4
E
161 172Right-handed alpha
Helix 50
AF5
E
172 191Right-handed alpha
Helix 51
AF6
E
201 216Right-handed alpha
Helix 52
AF7
E
222 234Right-handed alpha
Helix 53
AF8
E
234 261Right-handed alpha
Helix 54
AF9
E
269 282Right-handed alpha
Helix 55
AG1
E
293 312Right-handed alpha
Helix 56
AG2
E
312 356Right-handed alpha
Helix 57
AG3
E
529 552Right-handed alpha
Helix 58
AG4
E
559 584Right-handed alpha
Helix 59
AG5
F
7 20Right-handed alpha
Helix 60
AG6
F
29 41Right-handed alpha
Helix 61
AG7
F
45 56Right-handed alpha
Helix 62
AG8
F
67 73Right-handed alpha
Helix 63
AG9
F
79 94Right-handed alpha
Helix 64
AH1
F
102 113Right-handed alpha
Helix 65
AH2
F
118 129Right-handed alpha
Helix 66
AH3
F
138 148Right-handed alpha
Helix 67
AH4
G
75 93Right-handed alpha
Helix 68
AH5
G
95 97Right-handed 310
Helix 69
AH6
G
98 121Right-handed alpha
Helix 70
AH7
G
125 153Right-handed alpha
Helix 71
AH8
G
161 172Right-handed alpha
Helix 72
AH9
G
172 191Right-handed alpha
Helix 73
AI1
G
201 216Right-handed alpha
Helix 74
AI2
G
222 234Right-handed alpha
Helix 75
AI3
G
234 261Right-handed alpha
Helix 76
AI4
G
269 282Right-handed alpha
Helix 77
AI5
G
293 312Right-handed alpha
Helix 78
AI6
G
312 356Right-handed alpha
Helix 79
AI7
G
529 552Right-handed alpha
Helix 80
AI8
G
559 584Right-handed alpha
Helix 81
AI9
H
7 20Right-handed alpha
Helix 82
AJ1
H
29 41Right-handed alpha
Helix 83
AJ2
H
45 56Right-handed alpha
Helix 84
AJ3
H
67 73Right-handed alpha
Helix 85
AJ4
H
79 94Right-handed alpha
Helix 86
AJ5
H
102 113Right-handed alpha
Helix 87
AJ6
H
118 129Right-handed alpha
Helix 88
AJ7
H
138 148Right-handed alpha
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There are no sheets in PDB entry 7VNP
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