Analysis of interatomic Contacts of Structural Units in PDB entry:
7VO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VO4 entry

There are 2 chains in PDB entry 7VO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8LEU 283
B
 GLU 8LEU 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7VO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 23Right-handed alpha
Helix 2
AA2
A
24 38Right-handed alpha
Helix 3
AA3
A
44 48Right-handed 310
Helix 4
AA4
A
77 80Right-handed 310
Helix 5
AA5
A
81 87Right-handed alpha
Helix 6
AA6
A
111 128Right-handed alpha
Helix 7
AA7
A
139 154Right-handed alpha
Helix 8
AA8
A
182 188Right-handed alpha
Helix 9
AA9
A
199 212Right-handed alpha
Helix 10
AB1
A
232 234Right-handed 310
Helix 11
AB2
A
262 266Right-handed 310
Helix 12
AB3
A
268 283Right-handed alpha
Helix 13
AB4
B
11 22Right-handed alpha
Helix 14
AB5
B
24 38Right-handed alpha
Helix 15
AB6
B
44 48Right-handed 310
Helix 16
AB7
B
77 80Right-handed 310
Helix 17
AB8
B
81 87Right-handed alpha
Helix 18
AB9
B
111 128Right-handed alpha
Helix 19
AC1
B
139 156Right-handed alpha
Helix 20
AC2
B
182 190Right-handed alpha
Helix 21
AC3
B
199 214Right-handed alpha
Helix 22
AC4
B
262 266Right-handed 310
Helix 23
AC5
B
268 282Right-handed alpha
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There are 4 sheets in PDB entry 7VO4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
108 109parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 61first strand
Strand 2
A
92 97anti-parallel
Strand 3
A
65 69parallel
Strand 4
A
132 137parallel
Strand 5
A
161 165parallel
Strand 6
A
225 230parallel
Strand 7
A
253 257parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 42first strand
Strand 2
B
108 109parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
92 97anti-parallel
Strand 3
B
62 69parallel
Strand 4
B
132 137parallel
Strand 5
B
161 165parallel
Strand 6
B
225 230parallel
Strand 7
B
252 257parallel
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