Analysis of interatomic Contacts of Structural Units in PDB entry:
7VOB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VOB entry

There is 1 chain in PDB entry 7VOB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 THR 18TYR 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7VOB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
50 64Right-handed alpha
Helix 2
AA2
C
75 79Right-handed 310
Helix 3
AA3
C
81 92Right-handed alpha
Helix 4
AA4
C
104 115Right-handed alpha
Helix 5
AA5
C
128 136Right-handed alpha
Helix 6
AA6
C
140 155Right-handed alpha
Helix 7
AA7
C
169 171Right-handed 310
Helix 8
AA8
C
172 184Right-handed alpha
Helix 9
AA9
C
203 216Right-handed alpha
Helix 10
AB1
C
234 245Right-handed alpha
Helix 11
AB2
C
256 260Right-handed alpha
Helix 12
AB3
C
301 319Right-handed alpha
Helix 13
AB4
C
323 337Right-handed alpha
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There are 2 sheets in PDB entry 7VOB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
187 192first strand
Strand 2
C
158 165parallel
Strand 3
C
119 123parallel
Strand 4
C
95 100parallel
Strand 5
C
66 72parallel
Strand 6
C
21 26parallel
Strand 7
C
261 265parallel
Strand 8
C
270 272anti-parallel
Strand 9
C
289 290anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
292 293first strand
Strand 2
C
296 297anti-parallel
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