Analysis of interatomic Contacts of Structural Units in PDB entry:
7VON

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7VON entry

There is 1 chain in PDB entry 7VON (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 27	LEU 1392

There are 23 helices in PDB entry 7VON. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	602	608	Right-handed alpha
Helix 2	AA2	A	611	615	Right-handed 310
Helix 3	AA3	A	617	622	Right-handed alpha
Helix 4	AA4	A	642	647	Right-handed 310
Helix 5	AA5	A	665	674	Right-handed alpha
Helix 6	AA6	A	956	961	Right-handed alpha
Helix 7	AA7	A	972	994	Right-handed alpha
Helix 8	AA8	A	997	1013	Right-handed alpha
Helix 9	AA9	A	1015	1019	Right-handed 310
Helix 10	AB1	A	1030	1034	Right-handed 310
Helix 11	AB2	A	1038	1057	Right-handed alpha
Helix 12	AB3	A	1059	1069	Right-handed alpha
Helix 13	AB4	A	1099	1112	Right-handed alpha
Helix 14	AB5	A	1118	1136	Right-handed alpha
Helix 15	AB6	A	1143	1158	Right-handed alpha
Helix 16	AB7	A	1159	1174	Right-handed alpha
Helix 17	AB8	A	1204	1218	Right-handed alpha
Helix 18	AB9	A	1224	1241	Right-handed alpha
Helix 19	AC1	A	1250	1268	Right-handed alpha
Helix 20	AC2	A	1354	1358	Right-handed 310
Helix 21	AC3	A	1371	1375	Right-handed 310
Helix 22	AC4	A	1392	1398	Right-handed alpha
Helix 23	AC5	A	1399	1402	Right-handed 310

There are 26 sheets in PDB entry 7VON. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	90	first strand
Strand 2	A	44	51	anti-parallel
Strand 3	A	31	35	anti-parallel
Strand 4	A	676	679	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	77	first strand
Strand 2	A	59	63	anti-parallel
Strand 3	A	98	108	anti-parallel
Strand 4	A	114	123	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	148	151	anti-parallel
Strand 3	A	187	188	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	138	first strand
Strand 2	A	214	221	parallel
Strand 3	A	203	208	anti-parallel
Strand 4	A	164	168	anti-parallel
Strand 5	A	174	178	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	144	first strand
Strand 2	A	192	193	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	162	first strand
Strand 2	A	181	182	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	234	first strand
Strand 2	A	245	253	anti-parallel
Strand 3	A	301	305	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	240	first strand
Strand 2	A	342	344	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	289	first strand
Strand 2	A	263	269	anti-parallel
Strand 3	A	292	293	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	289	first strand
Strand 2	A	263	269	anti-parallel
Strand 3	A	319	324	anti-parallel
Strand 4	A	334	337	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	354	first strand
Strand 2	A	365	372	anti-parallel
Strand 3	A	404	409	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	359	first strand
Strand 2	A	445	450	parallel
Strand 3	A	416	422	anti-parallel
Strand 4	A	385	388	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	458	461	first strand
Strand 2	A	478	481	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	474	476	first strand
Strand 2	A	526	528	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	504	513	first strand
Strand 2	A	493	501	anti-parallel
Strand 3	A	537	545	anti-parallel
Strand 4	A	551	559	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	566	567	first strand
Strand 2	A	779	780	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	570	first strand
Strand 2	A	587	588	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	743	745	first strand
Strand 2	A	594	601	anti-parallel
Strand 3	A	765	772	anti-parallel
Strand 4	A	784	785	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	794	797	first strand
Strand 2	A	808	815	anti-parallel
Strand 3	A	853	862	anti-parallel
Strand 4	A	834	838	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	801	803	first strand
Strand 2	A	897	906	parallel
Strand 3	A	866	876	anti-parallel
Strand 4	A	824	828	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	910	915	first strand
Strand 2	A	1322	1332	anti-parallel
Strand 3	A	918	920	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	910	915	first strand
Strand 2	A	1322	1332	anti-parallel
Strand 3	A	945	951	anti-parallel
Strand 4	A	1301	1304	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	925	931	first strand
Strand 2	A	1312	1318	anti-parallel
Strand 3	A	1276	1282	anti-parallel
Strand 4	A	1287	1291	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1175	1177	first strand
Strand 2	A	1180	1182	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1341	1348	first strand
Strand 2	A	1362	1369	anti-parallel
Strand 3	A	1427	1435	anti-parallel
Strand 4	A	1389	1391	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1410	1411	first strand
Strand 2	A	1414	1419	anti-parallel
Strand 3	A	1379	1384	anti-parallel
Strand 4	A	1446	1451	anti-parallel
Strand 5	A	1461	1462	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7VON

Analysis of interatomic Contacts of Structural Units in PDB entry:
7VON