Analysis of interatomic Contacts of Structural Units in PDB entry:
7VOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VOX entry

There are 8 chains in PDB entry 7VOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 T 1 T 16
E
 A 1 A 16
F
 T 1 T 16
G
 A 1 A 16
A
 HIS 168ASN 252
B
 HIS 168SER 250
C
 HIS 168ASN 252
H
 HIS 168ASN 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7VOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
174 185Right-handed alpha
Helix 2
AA2
A
193 204Right-handed alpha
Helix 3
AA3
A
205 209Right-handed 310
Helix 4
AA4
A
210 225Right-handed alpha
Helix 5
AA5
A
248 251Right-handed 310
Helix 6
AA6
B
174 186Right-handed alpha
Helix 7
AA7
B
193 204Right-handed alpha
Helix 8
AA8
B
205 209Right-handed 310
Helix 9
AA9
B
210 225Right-handed alpha
Helix 10
AB1
C
174 186Right-handed alpha
Helix 11
AB2
C
187 190Right-handed 310
Helix 12
AB3
C
193 204Right-handed alpha
Helix 13
AB4
C
205 209Right-handed 310
Helix 14
AB5
C
210 225Right-handed alpha
Helix 15
AB6
H
174 185Right-handed alpha
Helix 16
AB7
H
193 204Right-handed alpha
Helix 17
AB8
H
205 209Right-handed 310
Helix 18
AB9
H
210 225Right-handed alpha
Helix 19
AC1
H
248 251Right-handed 310
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There are 4 sheets in PDB entry 7VOX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
243 246anti-parallel
Strand 3
A
228 231anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 192first strand
Strand 2
B
243 246anti-parallel
Strand 3
B
228 231anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
191 192first strand
Strand 2
C
243 246anti-parallel
Strand 3
C
228 231anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
191 192first strand
Strand 2
H
243 246anti-parallel
Strand 3
H
228 231anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il