Analysis of interatomic Contacts of Structural Units in PDB entry:
7VPR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VPR entry

There are 4 chains in PDB entry 7VPR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 626LEU 910
B
 SER 625LEU 910
C
 LEU 626LEU 910
D
 SER 625GLY 907
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 7VPR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
627 640Right-handed alpha
Helix 2
AA2
A
640 650Right-handed alpha
Helix 3
AA3
A
652 658Right-handed alpha
Helix 4
AA4
A
658 665Right-handed alpha
Helix 5
AA5
A
667 684Right-handed alpha
Helix 6
AA6
A
689 707Right-handed alpha
Helix 7
AA7
A
715 733Right-handed alpha
Helix 8
AA8
A
740 757Right-handed alpha
Helix 9
AA9
A
765 770Right-handed alpha
Helix 10
AB1
A
776 780Right-handed 310
Helix 11
AB2
A
797 801Right-handed 310
Helix 12
AB3
A
809 821Right-handed alpha
Helix 13
AB4
A
827 835Right-handed alpha
Helix 14
AB5
A
836 839Right-handed 310
Helix 15
AB6
A
840 849Right-handed alpha
Helix 16
AB7
A
851 875Right-handed alpha
Helix 17
AB8
A
876 880Right-handed 310
Helix 18
AB9
A
889 893Right-handed 310
Helix 19
AC1
A
897 904Right-handed alpha
Helix 20
AC2
B
627 640Right-handed alpha
Helix 21
AC3
B
640 648Right-handed alpha
Helix 22
AC4
B
652 658Right-handed alpha
Helix 23
AC5
B
658 665Right-handed alpha
Helix 24
AC6
B
667 683Right-handed alpha
Helix 25
AC7
B
689 708Right-handed alpha
Helix 26
AC8
B
715 733Right-handed alpha
Helix 27
AC9
B
739 757Right-handed alpha
Helix 28
AD1
B
797 801Right-handed 310
Helix 29
AD2
B
809 821Right-handed alpha
Helix 30
AD3
B
827 835Right-handed alpha
Helix 31
AD4
B
836 839Right-handed 310
Helix 32
AD5
B
840 849Right-handed alpha
Helix 33
AD6
B
851 872Right-handed alpha
Helix 34
AD7
B
876 880Right-handed 310
Helix 35
AD8
B
881 885Right-handed 310
Helix 36
AD9
B
889 893Right-handed 310
Helix 37
AE1
B
897 904Right-handed alpha
Helix 38
AE2
C
627 640Right-handed alpha
Helix 39
AE3
C
640 648Right-handed alpha
Helix 40
AE4
C
652 658Right-handed alpha
Helix 41
AE5
C
658 667Right-handed alpha
Helix 42
AE6
C
667 684Right-handed alpha
Helix 43
AE7
C
689 708Right-handed alpha
Helix 44
AE8
C
709 711Right-handed 310
Helix 45
AE9
C
715 733Right-handed alpha
Helix 46
AF1
C
740 757Right-handed alpha
Helix 47
AF2
C
763 769Right-handed 310
Helix 48
AF3
C
797 801Right-handed 310
Helix 49
AF4
C
809 821Right-handed alpha
Helix 50
AF5
C
827 835Right-handed alpha
Helix 51
AF6
C
836 839Right-handed 310
Helix 52
AF7
C
840 849Right-handed alpha
Helix 53
AF8
C
851 872Right-handed alpha
Helix 54
AF9
C
873 880Right-handed 310
Helix 55
AG1
C
889 893Right-handed 310
Helix 56
AG2
C
897 906Right-handed alpha
Helix 57
AG3
D
627 640Right-handed alpha
Helix 58
AG4
D
641 648Right-handed alpha
Helix 59
AG5
D
652 657Right-handed alpha
Helix 60
AG6
D
658 665Right-handed alpha
Helix 61
AG7
D
667 681Right-handed alpha
Helix 62
AG8
D
689 708Right-handed alpha
Helix 63
AG9
D
715 733Right-handed alpha
Helix 64
AH1
D
742 757Right-handed alpha
Helix 65
AH2
D
765 769Right-handed 310
Helix 66
AH3
D
809 823Right-handed alpha
Helix 67
AH4
D
827 835Right-handed alpha
Helix 68
AH5
D
836 839Right-handed 310
Helix 69
AH6
D
840 849Right-handed alpha
Helix 70
AH7
D
851 872Right-handed alpha
Helix 71
AH8
D
873 880Right-handed 310
Helix 72
AH9
D
881 886Right-handed alpha
Helix 73
AI1
D
889 893Right-handed 310
Helix 74
AI2
D
897 904Right-handed alpha
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There are no sheets in PDB entry 7VPR
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