Analysis of interatomic Contacts of Structural Units in PDB entry:
7VPS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VPS entry

There are 2 chains in PDB entry 7VPS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 75GLU 513
B
 SER 76GLU 513
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 7VPS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 98Right-handed alpha
Helix 2
AA2
A
101 117Right-handed alpha
Helix 3
AA3
A
123 131Right-handed alpha
Helix 4
AA4
A
132 139Right-handed alpha
Helix 5
AA5
A
145 161Right-handed alpha
Helix 6
AA6
A
163 173Right-handed alpha
Helix 7
AA7
A
174 186Right-handed alpha
Helix 8
AA8
A
187 203Right-handed alpha
Helix 9
AA9
A
205 215Right-handed alpha
Helix 10
AB1
A
217 224Right-handed alpha
Helix 11
AB2
A
225 227Right-handed 310
Helix 12
AB3
A
229 245Right-handed alpha
Helix 13
AB4
A
252 257Right-handed alpha
Helix 14
AB5
A
259 267Right-handed alpha
Helix 15
AB6
A
271 287Right-handed alpha
Helix 16
AB7
A
289 299Right-handed alpha
Helix 17
AB8
A
301 309Right-handed alpha
Helix 18
AB9
A
313 329Right-handed alpha
Helix 19
AC1
A
331 341Right-handed alpha
Helix 20
AC2
A
342 351Right-handed alpha
Helix 21
AC3
A
355 371Right-handed alpha
Helix 22
AC4
A
373 383Right-handed alpha
Helix 23
AC5
A
385 396Right-handed alpha
Helix 24
AC6
A
397 413Right-handed alpha
Helix 25
AC7
A
418 428Right-handed alpha
Helix 26
AC8
A
430 437Right-handed alpha
Helix 27
AC9
A
442 468Right-handed alpha
Helix 28
AD1
A
472 481Right-handed alpha
Helix 29
AD2
A
483 489Right-handed alpha
Helix 30
AD3
A
490 493Right-handed 310
Helix 31
AD4
A
495 510Right-handed alpha
Helix 32
AD5
B
77 98Right-handed alpha
Helix 33
AD6
B
101 118Right-handed alpha
Helix 34
AD7
B
123 129Right-handed alpha
Helix 35
AD8
B
132 139Right-handed alpha
Helix 36
AD9
B
145 161Right-handed alpha
Helix 37
AE1
B
163 173Right-handed alpha
Helix 38
AE2
B
174 186Right-handed alpha
Helix 39
AE3
B
187 203Right-handed alpha
Helix 40
AE4
B
205 215Right-handed alpha
Helix 41
AE5
B
217 224Right-handed alpha
Helix 42
AE6
B
225 227Right-handed 310
Helix 43
AE7
B
229 245Right-handed alpha
Helix 44
AE8
B
252 257Right-handed alpha
Helix 45
AE9
B
259 267Right-handed alpha
Helix 46
AF1
B
271 286Right-handed alpha
Helix 47
AF2
B
289 299Right-handed alpha
Helix 48
AF3
B
301 309Right-handed alpha
Helix 49
AF4
B
313 329Right-handed alpha
Helix 50
AF5
B
331 341Right-handed alpha
Helix 51
AF6
B
342 351Right-handed alpha
Helix 52
AF7
B
355 371Right-handed alpha
Helix 53
AF8
B
373 383Right-handed alpha
Helix 54
AF9
B
385 396Right-handed alpha
Helix 55
AG1
B
397 412Right-handed alpha
Helix 56
AG2
B
418 428Right-handed alpha
Helix 57
AG3
B
430 437Right-handed alpha
Helix 58
AG4
B
442 468Right-handed alpha
Helix 59
AG5
B
472 481Right-handed alpha
Helix 60
AG6
B
482 489Right-handed alpha
Helix 61
AG7
B
490 493Right-handed 310
Helix 62
AG8
B
495 510Right-handed alpha
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There are no sheets in PDB entry 7VPS
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