Analysis of interatomic Contacts of Structural Units in PDB entry:
7VPT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VPT entry

There is 1 chain in PDB entry 7VPT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 75GLY 543
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7VPT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 98Right-handed alpha
Helix 2
AA2
A
101 117Right-handed alpha
Helix 3
AA3
A
123 130Right-handed alpha
Helix 4
AA4
A
132 139Right-handed alpha
Helix 5
AA5
A
145 160Right-handed alpha
Helix 6
AA6
A
163 172Right-handed alpha
Helix 7
AA7
A
174 186Right-handed alpha
Helix 8
AA8
A
187 205Right-handed alpha
Helix 9
AA9
A
205 215Right-handed alpha
Helix 10
AB1
A
217 223Right-handed alpha
Helix 11
AB2
A
224 227Right-handed 310
Helix 12
AB3
A
229 245Right-handed alpha
Helix 13
AB4
A
252 257Right-handed alpha
Helix 14
AB5
A
259 267Right-handed alpha
Helix 15
AB6
A
271 286Right-handed alpha
Helix 16
AB7
A
289 299Right-handed alpha
Helix 17
AB8
A
301 309Right-handed alpha
Helix 18
AB9
A
313 328Right-handed alpha
Helix 19
AC1
A
331 341Right-handed alpha
Helix 20
AC2
A
342 351Right-handed alpha
Helix 21
AC3
A
355 371Right-handed alpha
Helix 22
AC4
A
373 383Right-handed alpha
Helix 23
AC5
A
385 396Right-handed alpha
Helix 24
AC6
A
397 415Right-handed alpha
Helix 25
AC7
A
418 428Right-handed alpha
Helix 26
AC8
A
430 438Right-handed alpha
Helix 27
AC9
A
442 468Right-handed alpha
Helix 28
AD1
A
472 481Right-handed alpha
Helix 29
AD2
A
482 490Right-handed alpha
Helix 30
AD3
A
491 493Right-handed 310
Helix 31
AD4
A
495 510Right-handed alpha
Helix 32
AD5
A
511 515Right-handed 310
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There are no sheets in PDB entry 7VPT
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