Analysis of interatomic Contacts of Structural Units in PDB entry:
7VPU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VPU entry

There are 4 chains in PDB entry 7VPU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 476PRO 773
B
 THR 475LEU 772
C
 LEU 476GLY 771
D
 THR 475GLY 771
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 7VPU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
477 490Right-handed alpha
Helix 2
AA2
A
491 497Right-handed alpha
Helix 3
AA3
A
502 508Right-handed alpha
Helix 4
AA4
A
508 515Right-handed alpha
Helix 5
AA5
A
517 533Right-handed alpha
Helix 6
AA6
A
539 558Right-handed alpha
Helix 7
AA7
A
565 583Right-handed alpha
Helix 8
AA8
A
604 620Right-handed alpha
Helix 9
AA9
A
672 685Right-handed alpha
Helix 10
AB1
A
690 698Right-handed alpha
Helix 11
AB2
A
699 701Right-handed 310
Helix 12
AB3
A
703 712Right-handed alpha
Helix 13
AB4
A
714 736Right-handed alpha
Helix 14
AB5
A
739 743Right-handed 310
Helix 15
AB6
A
752 756Right-handed 310
Helix 16
AB7
A
758 766Right-handed alpha
Helix 17
AB8
B
477 490Right-handed alpha
Helix 18
AB9
B
491 497Right-handed alpha
Helix 19
AC1
B
502 508Right-handed alpha
Helix 20
AC2
B
508 517Right-handed alpha
Helix 21
AC3
B
517 533Right-handed alpha
Helix 22
AC4
B
539 558Right-handed alpha
Helix 23
AC5
B
565 582Right-handed alpha
Helix 24
AC6
B
604 620Right-handed alpha
Helix 25
AC7
B
628 633Right-handed alpha
Helix 26
AC8
B
660 664Right-handed 310
Helix 27
AC9
B
672 685Right-handed alpha
Helix 28
AD1
B
690 698Right-handed alpha
Helix 29
AD2
B
699 702Right-handed 310
Helix 30
AD3
B
703 712Right-handed alpha
Helix 31
AD4
B
714 736Right-handed alpha
Helix 32
AD5
B
739 743Right-handed 310
Helix 33
AD6
B
744 749Right-handed alpha
Helix 34
AD7
B
752 756Right-handed 310
Helix 35
AD8
B
759 769Right-handed alpha
Helix 36
AD9
C
477 490Right-handed alpha
Helix 37
AE1
C
491 497Right-handed alpha
Helix 38
AE2
C
502 508Right-handed alpha
Helix 39
AE3
C
508 517Right-handed alpha
Helix 40
AE4
C
517 533Right-handed alpha
Helix 41
AE5
C
539 558Right-handed alpha
Helix 42
AE6
C
565 583Right-handed alpha
Helix 43
AE7
C
604 620Right-handed alpha
Helix 44
AE8
C
672 685Right-handed alpha
Helix 45
AE9
C
690 698Right-handed alpha
Helix 46
AF1
C
699 701Right-handed 310
Helix 47
AF2
C
703 712Right-handed alpha
Helix 48
AF3
C
714 736Right-handed alpha
Helix 49
AF4
C
739 743Right-handed 310
Helix 50
AF5
C
752 756Right-handed 310
Helix 51
AF6
C
758 766Right-handed alpha
Helix 52
AF7
D
477 490Right-handed alpha
Helix 53
AF8
D
490 497Right-handed alpha
Helix 54
AF9
D
502 508Right-handed alpha
Helix 55
AG1
D
508 517Right-handed alpha
Helix 56
AG2
D
517 533Right-handed alpha
Helix 57
AG3
D
539 558Right-handed alpha
Helix 58
AG4
D
565 582Right-handed alpha
Helix 59
AG5
D
604 620Right-handed alpha
Helix 60
AG6
D
628 633Right-handed alpha
Helix 61
AG7
D
660 664Right-handed 310
Helix 62
AG8
D
672 685Right-handed alpha
Helix 63
AG9
D
690 698Right-handed alpha
Helix 64
AH1
D
699 702Right-handed 310
Helix 65
AH2
D
703 711Right-handed alpha
Helix 66
AH3
D
714 736Right-handed alpha
Helix 67
AH4
D
739 743Right-handed 310
Helix 68
AH5
D
744 749Right-handed alpha
Helix 69
AH6
D
752 756Right-handed 310
Helix 70
AH7
D
759 769Right-handed alpha
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There are no sheets in PDB entry 7VPU
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