Analysis of interatomic Contacts of Structural Units in PDB entry:
7VPW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VPW entry

There are 2 chains in PDB entry 7VPW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 718TYR 724
A
 LYS 6VAL 890
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 7VPW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 23Right-handed alpha
Helix 2
AA2
A
26 41Right-handed alpha
Helix 3
AA3
A
44 57Right-handed alpha
Helix 4
AA4
A
61 78Right-handed alpha
Helix 5
AA5
A
79 83Right-handed 310
Helix 6
AA6
A
84 98Right-handed alpha
Helix 7
AA7
A
103 120Right-handed alpha
Helix 8
AA8
A
122 126Right-handed 310
Helix 9
AA9
A
128 136Right-handed alpha
Helix 10
AB1
A
137 139Right-handed 310
Helix 11
AB2
A
141 159Right-handed alpha
Helix 12
AB3
A
159 164Right-handed alpha
Helix 13
AB4
A
165 170Right-handed 310
Helix 14
AB5
A
171 182Right-handed alpha
Helix 15
AB6
A
183 185Right-handed 310
Helix 16
AB7
A
187 200Right-handed alpha
Helix 17
AB8
A
206 211Right-handed alpha
Helix 18
AB9
A
212 224Right-handed alpha
Helix 19
AC1
A
228 246Right-handed alpha
Helix 20
AC2
A
246 251Right-handed alpha
Helix 21
AC3
A
253 266Right-handed alpha
Helix 22
AC4
A
269 285Right-handed alpha
Helix 23
AC5
A
288 293Right-handed alpha
Helix 24
AC6
A
296 308Right-handed alpha
Helix 25
AC7
A
311 319Right-handed alpha
Helix 26
AC8
A
374 391Right-handed alpha
Helix 27
AC9
A
392 397Right-handed 310
Helix 28
AD1
A
398 406Right-handed alpha
Helix 29
AD2
A
410 424Right-handed alpha
Helix 30
AD3
A
424 433Right-handed alpha
Helix 31
AD4
A
435 447Right-handed alpha
Helix 32
AD5
A
451 465Right-handed alpha
Helix 33
AD6
A
465 472Right-handed alpha
Helix 34
AD7
A
477 490Right-handed alpha
Helix 35
AD8
A
493 512Right-handed alpha
Helix 36
AD9
A
513 517Right-handed 310
Helix 37
AE1
A
518 533Right-handed alpha
Helix 38
AE2
A
535 553Right-handed alpha
Helix 39
AE3
A
554 557Right-handed 310
Helix 40
AE4
A
558 576Right-handed alpha
Helix 41
AE5
A
582 598Right-handed alpha
Helix 42
AE6
A
599 603Right-handed 310
Helix 43
AE7
A
604 629Right-handed alpha
Helix 44
AE8
A
638 656Right-handed alpha
Helix 45
AE9
A
659 664Right-handed alpha
Helix 46
AF1
A
667 676Right-handed alpha
Helix 47
AF2
A
680 698Right-handed alpha
Helix 48
AF3
A
698 703Right-handed alpha
Helix 49
AF4
A
705 717Right-handed alpha
Helix 50
AF5
A
721 740Right-handed alpha
Helix 51
AF6
A
741 745Right-handed 310
Helix 52
AF7
A
746 759Right-handed alpha
Helix 53
AF8
A
764 782Right-handed alpha
Helix 54
AF9
A
782 787Right-handed alpha
Helix 55
AG1
A
788 792Right-handed 310
Helix 56
AG2
A
793 802Right-handed alpha
Helix 57
AG3
A
807 822Right-handed alpha
Helix 58
AG4
A
825 830Right-handed alpha
Helix 59
AG5
A
831 841Right-handed alpha
Helix 60
AG6
A
846 865Right-handed alpha
Helix 61
AG7
A
865 874Right-handed alpha
Helix 62
AG8
A
877 889Right-handed alpha
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There are no sheets in PDB entry 7VPW
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