Analysis of interatomic Contacts of Structural Units in PDB entry:
7VQ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VQ3 entry

There are 2 chains in PDB entry 7VQ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 405
B
 MET 1MET 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7VQ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 18Right-handed alpha
Helix 2
AA2
A
19 41Right-handed alpha
Helix 3
AA3
A
53 66Right-handed alpha
Helix 4
AA4
A
69 102Right-handed alpha
Helix 5
AA5
A
105 125Right-handed alpha
Helix 6
AA6
A
127 134Right-handed alpha
Helix 7
AA7
A
134 151Right-handed alpha
Helix 8
AA8
A
158 183Right-handed alpha
Helix 9
AA9
A
187 214Right-handed alpha
Helix 10
AB1
A
223 241Right-handed alpha
Helix 11
AB2
A
243 254Right-handed alpha
Helix 12
AB3
A
267 294Right-handed alpha
Helix 13
AB4
A
299 305Right-handed alpha
Helix 14
AB5
A
306 330Right-handed alpha
Helix 15
AB6
A
335 356Right-handed alpha
Helix 16
AB7
A
364 398Right-handed alpha
Helix 17
AB8
B
2 18Right-handed alpha
Helix 18
AB9
B
19 41Right-handed alpha
Helix 19
AC1
B
53 66Right-handed alpha
Helix 20
AC2
B
69 102Right-handed alpha
Helix 21
AC3
B
105 125Right-handed alpha
Helix 22
AC4
B
127 134Right-handed alpha
Helix 23
AC5
B
134 151Right-handed alpha
Helix 24
AC6
B
158 183Right-handed alpha
Helix 25
AC7
B
187 214Right-handed alpha
Helix 26
AC8
B
223 241Right-handed alpha
Helix 27
AC9
B
243 254Right-handed alpha
Helix 28
AD1
B
267 294Right-handed alpha
Helix 29
AD2
B
299 305Right-handed alpha
Helix 30
AD3
B
306 330Right-handed alpha
Helix 31
AD4
B
335 356Right-handed alpha
Helix 32
AD5
B
364 398Right-handed alpha
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There are no sheets in PDB entry 7VQ3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il