Analysis of interatomic Contacts of Structural Units in PDB entry:
7VR1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VR1 entry

There are 2 chains in PDB entry 7VR1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASN 68GLU 695
A
 ASN 68GLU 695
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 7VR1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
70 83Right-handed alpha
Helix 2
AA2
B
88 100Right-handed alpha
Helix 3
AA3
B
101 123Right-handed alpha
Helix 4
AA4
B
126 140Right-handed alpha
Helix 5
AA5
B
140 175Right-handed alpha
Helix 6
AA6
B
178 186Right-handed alpha
Helix 7
AA7
B
192 216Right-handed alpha
Helix 8
AA8
B
216 235Right-handed alpha
Helix 9
AA9
B
241 261Right-handed alpha
Helix 10
AB1
B
261 289Right-handed alpha
Helix 11
AB2
B
292 297Right-handed alpha
Helix 12
AB3
B
298 337Right-handed alpha
Helix 13
AB4
B
338 353Right-handed alpha
Helix 14
AB5
B
361 371Right-handed alpha
Helix 15
AB6
B
377 407Right-handed alpha
Helix 16
AB7
B
408 431Right-handed alpha
Helix 17
AB8
B
535 539Right-handed 310
Helix 18
AB9
B
553 558Right-handed alpha
Helix 19
AC1
B
575 584Right-handed alpha
Helix 20
AC2
B
585 592Right-handed alpha
Helix 21
AC3
B
600 605Right-handed alpha
Helix 22
AC4
B
606 622Right-handed alpha
Helix 23
AC5
B
636 651Right-handed alpha
Helix 24
AC6
B
660 666Right-handed 310
Helix 25
AC7
B
685 688Right-handed 310
Helix 26
AC8
B
689 695Right-handed alpha
Helix 27
AC9
A
70 83Right-handed alpha
Helix 28
AD1
A
88 123Right-handed alpha
Helix 29
AD2
A
126 175Right-handed alpha
Helix 30
AD3
A
178 186Right-handed alpha
Helix 31
AD4
A
192 199Right-handed alpha
Helix 32
AD5
A
199 235Right-handed alpha
Helix 33
AD6
A
241 260Right-handed alpha
Helix 34
AD7
A
261 289Right-handed alpha
Helix 35
AD8
A
292 297Right-handed alpha
Helix 36
AD9
A
298 337Right-handed alpha
Helix 37
AE1
A
338 353Right-handed alpha
Helix 38
AE2
A
363 372Right-handed alpha
Helix 39
AE3
A
377 406Right-handed alpha
Helix 40
AE4
A
408 431Right-handed alpha
Helix 41
AE5
A
535 537Right-handed 310
Helix 42
AE6
A
553 558Right-handed alpha
Helix 43
AE7
A
575 584Right-handed alpha
Helix 44
AE8
A
606 622Right-handed alpha
Helix 45
AE9
A
636 650Right-handed alpha
Helix 46
AF1
A
660 664Right-handed 310
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There are 5 sheets in PDB entry 7VR1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
474 475first strand
Strand 2
B
496 497anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
504 505first strand
Strand 2
B
653 657parallel
Strand 3
B
625 628parallel
Strand 4
B
541 542parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
672 673first strand
Strand 2
B
679 680anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 475first strand
Strand 2
A
496 497anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 542first strand
Strand 2
A
625 628parallel
Strand 3
A
653 656parallel
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