Analysis of interatomic Contacts of Structural Units in PDB entry:
7VR4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VR4 entry

There is 1 chain in PDB entry 7VR4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2GLU 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7VR4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 23Right-handed 310
Helix 2
AA2
A
54 62Right-handed 310
Helix 3
AA3
A
127 133Right-handed 310
Helix 4
AA4
A
136 148Right-handed alpha
Helix 5
AA5
A
167 178Right-handed alpha
Helix 6
AA6
A
188 198Right-handed alpha
Helix 7
AA7
A
208 210Right-handed 310
Helix 8
AA8
A
212 221Right-handed alpha
Helix 9
AA9
A
233 241Right-handed alpha
Helix 10
AB1
A
255 259Right-handed 310
Helix 11
AB2
A
270 276Right-handed alpha
Helix 12
AB3
A
284 290Right-handed 310
Helix 13
AB4
A
291 305Right-handed alpha
Helix 14
AB5
A
320 328Right-handed alpha
Helix 15
AB6
A
329 331Right-handed 310
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There are 4 sheets in PDB entry 7VR4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 12first strand
Strand 2
A
25 33anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 112first strand
Strand 2
A
44 52anti-parallel
Strand 3
A
79 89anti-parallel
Strand 4
A
99 105anti-parallel
Strand 5
A
118 120anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 112first strand
Strand 2
A
44 52anti-parallel
Strand 3
A
336 340anti-parallel
Strand 4
A
312 316parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 206first strand
Strand 2
A
181 186parallel
Strand 3
A
157 160parallel
Strand 4
A
225 230parallel
Strand 5
A
244 252parallel
Strand 6
A
279 282parallel
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