Analysis of interatomic Contacts of Structural Units in PDB entry:
7VR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VR8 entry

There is 1 chain in PDB entry 7VR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 44GLU 500
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 7VR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 68Right-handed alpha
Helix 2
AA2
A
71 91Right-handed alpha
Helix 3
AA3
A
92 108Right-handed alpha
Helix 4
AA4
A
115 143Right-handed alpha
Helix 5
AA5
A
164 175Right-handed alpha
Helix 6
AA6
A
179 184Right-handed alpha
Helix 7
AA7
A
241 260Right-handed alpha
Helix 8
AA8
A
263 303Right-handed alpha
Helix 9
AA9
A
305 330Right-handed alpha
Helix 10
AB1
A
330 341Right-handed alpha
Helix 11
AB2
A
343 362Right-handed alpha
Helix 12
AB3
A
363 378Right-handed alpha
Helix 13
AB4
A
382 397Right-handed alpha
Helix 14
AB5
A
398 416Right-handed alpha
Helix 15
AB6
A
421 440Right-handed alpha
Helix 16
AB7
A
445 458Right-handed alpha
Helix 17
AB8
A
463 497Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7VR8.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 192first strand
Strand 2
A
232 238anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il