Analysis of interatomic Contacts of Structural Units in PDB entry:
7VS3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VS3 entry

There is 1 chain in PDB entry 7VS3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 391PRO 630
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 7VS3. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
606 622Right-handed alpha
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There are 4 sheets in PDB entry 7VS3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 449first strand
Strand 2
A
396 406anti-parallel
Strand 3
A
507 514anti-parallel
Strand 4
A
491 494anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 430first strand
Strand 2
A
416 423anti-parallel
Strand 3
A
434 435anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 430first strand
Strand 2
A
416 423anti-parallel
Strand 3
A
456 463anti-parallel
Strand 4
A
472 480anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 569first strand
Strand 2
A
552 557anti-parallel
Strand 3
A
538 546anti-parallel
Strand 4
A
520 530anti-parallel
Strand 5
A
598 604anti-parallel
Strand 6
A
589 595anti-parallel
Strand 7
A
574 577anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il