Analysis of interatomic Contacts of Structural Units in PDB entry:
7VU2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VU2 entry

There is 1 chain in PDB entry 7VU2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8PHE 442
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 7VU2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 64Right-handed 310
Helix 2
AA2
A
97 101Right-handed 310
Helix 3
AA3
A
162 164Right-handed 310
Helix 4
AA4
A
345 348Right-handed 310
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There are 4 sheets in PDB entry 7VU2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 19 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 30first strand
Strand 2
A
42 58anti-parallel
Strand 3
A
66 80anti-parallel
Strand 4
A
109 121anti-parallel
Strand 5
A
124 131anti-parallel
Strand 6
A
149 160anti-parallel
Strand 7
A
166 178anti-parallel
Strand 8
A
200 208anti-parallel
Strand 9
A
214 222anti-parallel
Strand 10
A
226 239anti-parallel
Strand 11
A
242 255anti-parallel
Strand 12
A
271 282anti-parallel
Strand 13
A
285 295anti-parallel
Strand 14
A
334 343anti-parallel
Strand 15
A
352 364anti-parallel
Strand 16
A
378 390anti-parallel
Strand 17
A
400 410anti-parallel
Strand 18
A
428 440anti-parallel
Strand 19
A
15 30anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
106 107anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
315 316anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
196 197anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il