Analysis of interatomic Contacts of Structural Units in PDB entry:
7VU3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VU3 entry

There is 1 chain in PDB entry 7VU3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1PHE 435
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 7VU3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 57Right-handed 310
Helix 2
AA2
A
90 94Right-handed 310
Helix 3
AA3
A
155 157Right-handed 310
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There are 4 sheets in PDB entry 7VU3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 19 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 23first strand
Strand 2
A
35 51anti-parallel
Strand 3
A
59 73anti-parallel
Strand 4
A
102 114anti-parallel
Strand 5
A
117 124anti-parallel
Strand 6
A
142 153anti-parallel
Strand 7
A
159 171anti-parallel
Strand 8
A
193 201anti-parallel
Strand 9
A
206 215anti-parallel
Strand 10
A
219 231anti-parallel
Strand 11
A
236 248anti-parallel
Strand 12
A
264 275anti-parallel
Strand 13
A
278 288anti-parallel
Strand 14
A
327 336anti-parallel
Strand 15
A
345 357anti-parallel
Strand 16
A
371 383anti-parallel
Strand 17
A
393 403anti-parallel
Strand 18
A
421 433anti-parallel
Strand 19
A
8 23anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
A
99 100anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
308 309anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
189 190anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il