Analysis of interatomic Contacts of Structural Units in PDB entry:
7VUA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VUA entry

There are 2 chains in PDB entry 7VUA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 785
B
 MET 1LEU 785
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 7VUA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed alpha
Helix 2
AA2
A
22 33Right-handed alpha
Helix 3
AA3
A
39 55Right-handed alpha
Helix 4
AA4
A
84 89Right-handed alpha
Helix 5
AA5
A
90 93Right-handed 310
Helix 6
AA6
A
107 113Right-handed alpha
Helix 7
AA7
A
115 120Right-handed alpha
Helix 8
AA8
A
123 130Right-handed alpha
Helix 9
AA9
A
131 132Right-handed 310
Helix 10
AB1
A
133 134Right-handed 310
Helix 11
AB2
A
135 143Right-handed alpha
Helix 12
AB3
A
160 168Right-handed alpha
Helix 13
AB4
A
168 183Right-handed alpha
Helix 14
AB5
A
187 189Right-handed 310
Helix 15
AB6
A
190 224Right-handed alpha
Helix 16
AB7
A
227 244Right-handed alpha
Helix 17
AB8
A
251 270Right-handed alpha
Helix 18
AB9
A
279 284Right-handed alpha
Helix 19
AC1
A
284 294Right-handed alpha
Helix 20
AC2
A
297 314Right-handed alpha
Helix 21
AC3
A
322 327Right-handed alpha
Helix 22
AC4
A
350 363Right-handed alpha
Helix 23
AC5
A
379 392Right-handed alpha
Helix 24
AC6
A
402 411Right-handed alpha
Helix 25
AC7
A
415 420Right-handed alpha
Helix 26
AC8
A
446 455Right-handed alpha
Helix 27
AC9
A
473 477Right-handed 310
Helix 28
AD1
A
479 510Right-handed alpha
Helix 29
AD2
A
516 521Right-handed alpha
Helix 30
AD3
A
524 529Right-handed alpha
Helix 31
AD4
A
531 535Right-handed 310
Helix 32
AD5
A
549 564Right-handed alpha
Helix 33
AD6
A
571 580Right-handed alpha
Helix 34
AD7
A
585 595Right-handed alpha
Helix 35
AD8
A
603 622Right-handed alpha
Helix 36
AD9
A
640 647Right-handed alpha
Helix 37
AE1
A
676 685Right-handed alpha
Helix 38
AE2
A
686 688Right-handed 310
Helix 39
AE3
A
710 726Right-handed alpha
Helix 40
AE4
A
737 747Right-handed alpha
Helix 41
AE5
A
748 751Right-handed 310
Helix 42
AE6
A
766 768Right-handed 310
Helix 43
AE7
A
769 778Right-handed alpha
Helix 44
AE8
B
3 16Right-handed alpha
Helix 45
AE9
B
22 32Right-handed alpha
Helix 46
AF1
B
39 55Right-handed alpha
Helix 47
AF2
B
84 89Right-handed alpha
Helix 48
AF3
B
90 93Right-handed 310
Helix 49
AF4
B
111 120Right-handed alpha
Helix 50
AF5
B
123 130Right-handed alpha
Helix 51
AF6
B
131 132Right-handed 310
Helix 52
AF7
B
133 134Right-handed 310
Helix 53
AF8
B
135 142Right-handed alpha
Helix 54
AF9
B
160 183Right-handed alpha
Helix 55
AG1
B
187 189Right-handed 310
Helix 56
AG2
B
190 224Right-handed alpha
Helix 57
AG3
B
227 242Right-handed alpha
Helix 58
AG4
B
251 270Right-handed alpha
Helix 59
AG5
B
279 284Right-handed alpha
Helix 60
AG6
B
284 294Right-handed alpha
Helix 61
AG7
B
297 314Right-handed alpha
Helix 62
AG8
B
322 327Right-handed alpha
Helix 63
AG9
B
350 363Right-handed alpha
Helix 64
AH1
B
379 392Right-handed alpha
Helix 65
AH2
B
402 412Right-handed alpha
Helix 66
AH3
B
415 421Right-handed alpha
Helix 67
AH4
B
446 456Right-handed alpha
Helix 68
AH5
B
473 477Right-handed 310
Helix 69
AH6
B
479 513Right-handed alpha
Helix 70
AH7
B
516 521Right-handed alpha
Helix 71
AH8
B
524 529Right-handed alpha
Helix 72
AH9
B
531 535Right-handed 310
Helix 73
AI1
B
549 563Right-handed alpha
Helix 74
AI2
B
570 580Right-handed alpha
Helix 75
AI3
B
585 595Right-handed alpha
Helix 76
AI4
B
603 622Right-handed alpha
Helix 77
AI5
B
640 647Right-handed alpha
Helix 78
AI6
B
676 684Right-handed alpha
Helix 79
AI7
B
685 688Right-handed 310
Helix 80
AI8
B
714 726Right-handed alpha
Helix 81
AI9
B
738 747Right-handed alpha
Helix 82
AJ1
B
748 751Right-handed 310
Helix 83
AJ2
B
766 768Right-handed 310
Helix 84
AJ3
B
769 777Right-handed alpha
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There are 13 sheets in PDB entry 7VUA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
75 76parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 339first strand
Strand 2
A
369 374parallel
Strand 3
A
398 401parallel
Strand 4
A
730 735anti-parallel
Strand 5
A
699 702parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 424first strand
Strand 2
A
430 432anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 439first strand
Strand 2
A
540 546parallel
Strand 3
A
444 445parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 439first strand
Strand 2
A
540 546parallel
Strand 3
A
632 636parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 460first strand
Strand 2
A
465 466anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
755 757first strand
Strand 2
A
762 764anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 20first strand
Strand 2
B
75 76parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
335 339first strand
Strand 2
B
369 374parallel
Strand 3
B
398 401parallel
Strand 4
B
730 734anti-parallel
Strand 5
B
699 702parallel
Strand 6
B
781 782parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
422 424first strand
Strand 2
B
430 432anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
437 439first strand
Strand 2
B
540 546parallel
Strand 3
B
444 445parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
437 439first strand
Strand 2
B
540 546parallel
Strand 3
B
632 636parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
755 756first strand
Strand 2
B
763 764anti-parallel
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