Analysis of interatomic Contacts of Structural Units in PDB entry:
7VVA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7VVA entry

There are 5 chains in PDB entry 7VVA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 3	ALA 309
B	GLU 3	ALA 309
C	GLU 3	ALA 309
D	ARG 2	ALA 309
E	GLU 3	ASN 143

There are 91 helices in PDB entry 7VVA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	41	53	Right-handed alpha
Helix 2	AA2	A	66	79	Right-handed alpha
Helix 3	AA3	A	115	120	Right-handed 310
Helix 4	AA4	A	121	127	Right-handed alpha
Helix 5	AA5	A	145	155	Right-handed alpha
Helix 6	AA6	A	170	181	Right-handed 310
Helix 7	AA7	A	187	196	Right-handed alpha
Helix 8	AA8	A	204	215	Right-handed alpha
Helix 9	AA9	A	253	268	Right-handed alpha
Helix 10	AB1	A	271	288	Right-handed alpha
Helix 11	AB2	A	298	308	Right-handed alpha
Helix 12	AB3	B	41	53	Right-handed alpha
Helix 13	AB4	B	66	79	Right-handed alpha
Helix 14	AB5	B	115	119	Right-handed 310
Helix 15	AB6	B	121	127	Right-handed alpha
Helix 16	AB7	B	128	134	Right-handed alpha
Helix 17	AB8	B	145	155	Right-handed alpha
Helix 18	AB9	B	171	181	Right-handed 310
Helix 19	AC1	B	187	196	Right-handed alpha
Helix 20	AC2	B	204	215	Right-handed alpha
Helix 21	AC3	B	225	227	Right-handed 310
Helix 22	AC4	B	253	268	Right-handed alpha
Helix 23	AC5	B	271	288	Right-handed alpha
Helix 24	AC6	B	298	309	Right-handed alpha
Helix 25	AC7	C	41	53	Right-handed alpha
Helix 26	AC8	C	66	79	Right-handed alpha
Helix 27	AC9	C	115	120	Right-handed 310
Helix 28	AD1	C	121	127	Right-handed alpha
Helix 29	AD2	C	128	134	Right-handed alpha
Helix 30	AD3	C	145	155	Right-handed alpha
Helix 31	AD4	C	171	175	Right-handed 310
Helix 32	AD5	C	177	181	Right-handed 310
Helix 33	AD6	C	187	196	Right-handed alpha
Helix 34	AD7	C	203	215	Right-handed alpha
Helix 35	AD8	C	253	268	Right-handed alpha
Helix 36	AD9	C	271	288	Right-handed alpha
Helix 37	AE1	C	298	308	Right-handed alpha
Helix 38	AE2	D	41	53	Right-handed alpha
Helix 39	AE3	D	66	79	Right-handed alpha
Helix 40	AE4	D	115	120	Right-handed 310
Helix 41	AE5	D	121	127	Right-handed alpha
Helix 42	AE6	D	128	134	Right-handed alpha
Helix 43	AE7	D	145	155	Right-handed alpha
Helix 44	AE8	D	171	175	Right-handed 310
Helix 45	AE9	D	177	181	Right-handed 310
Helix 46	AF1	D	187	196	Right-handed alpha
Helix 47	AF2	D	203	215	Right-handed alpha
Helix 48	AF3	D	253	268	Right-handed alpha
Helix 49	AF4	D	271	288	Right-handed alpha
Helix 50	AF5	D	298	308	Right-handed alpha
Helix 51	AF6	E	41	53	Right-handed alpha
Helix 52	AF7	E	66	79	Right-handed alpha
Helix 53	AF8	E	115	119	Right-handed 310
Helix 54	AF9	E	121	127	Right-handed alpha
Helix 55	AG1	E	128	133	Right-handed alpha
Helix 56	AG2	E	145	155	Right-handed alpha
Helix 57	AG3	E	171	181	Right-handed 310
Helix 58	AG4	E	187	196	Right-handed alpha
Helix 59	AG5	E	205	215	Right-handed alpha
Helix 60	AG6	E	253	268	Right-handed alpha
Helix 61	AG7	E	271	288	Right-handed alpha
Helix 62	AG8	E	298	308	Right-handed alpha
Helix 63	AG9	F	41	51	Right-handed alpha
Helix 64	AH1	F	66	79	Right-handed alpha
Helix 65	AH2	F	115	120	Right-handed 310
Helix 66	AH3	F	121	127	Right-handed alpha
Helix 67	AH4	F	128	134	Right-handed alpha
Helix 68	AH5	F	145	155	Right-handed alpha
Helix 69	AH6	F	171	175	Right-handed 310
Helix 70	AH7	F	177	181	Right-handed 310
Helix 71	AH8	F	204	215	Right-handed alpha
Helix 72	AH9	F	255	268	Right-handed alpha
Helix 73	AI1	F	271	288	Right-handed alpha
Helix 74	AI2	F	298	306	Right-handed alpha
Helix 75	AI3	G	41	49	Right-handed alpha
Helix 76	AI4	G	66	79	Right-handed alpha
Helix 77	AI5	G	115	119	Right-handed 310
Helix 78	AI6	G	121	127	Right-handed alpha
Helix 79	AI7	G	145	155	Right-handed alpha
Helix 80	AI8	G	187	192	Right-handed alpha
Helix 81	AI9	G	193	195	Right-handed 310
Helix 82	AJ1	G	261	267	Right-handed 310
Helix 83	AJ2	G	298	309	Right-handed alpha
Helix 84	AJ3	H	41	46	Right-handed alpha
Helix 85	AJ4	H	48	48	Right-handed 310
Helix 86	AJ5	H	50	54	Right-handed 310
Helix 87	AJ6	H	66	78	Right-handed alpha
Helix 88	AJ7	H	116	121	Right-handed 310
Helix 89	AJ8	H	122	127	Right-handed alpha
Helix 90	AJ9	H	128	132	Right-handed 310
Helix 91	AK1	H	145	152	Right-handed alpha

There are 27 sheets in PDB entry 7VVA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	59	first strand
Strand 2	A	7	10	parallel
Strand 3	A	137	141	parallel
Strand 4	A	161	164	parallel
Strand 5	A	183	184	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	40	first strand
Strand 2	A	14	21	anti-parallel
Strand 3	A	96	99	parallel
Strand 4	A	111	113	anti-parallel
Strand 5	H	31	32	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	64	first strand
Strand 2	A	87	89	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	224	first strand
Strand 2	A	228	233	anti-parallel
Strand 3	A	238	241	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	59	first strand
Strand 2	B	7	10	parallel
Strand 3	B	137	141	parallel
Strand 4	B	161	164	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	31	32	first strand
Strand 2	B	108	113	parallel
Strand 3	B	95	101	anti-parallel
Strand 4	B	14	21	parallel
Strand 5	B	31	40	anti-parallel
Strand 6	G	110	113	parallel
Strand 7	G	95	100	anti-parallel
Strand 8	G	14	20	parallel
Strand 9	G	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	63	first strand
Strand 2	B	87	88	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	183	184	first strand
Strand 2	B	219	223	parallel
Strand 3	B	229	233	anti-parallel
Strand 4	B	238	241	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	59	first strand
Strand 2	C	7	10	parallel
Strand 3	C	137	141	parallel
Strand 4	C	161	164	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	40	first strand
Strand 2	C	14	20	anti-parallel
Strand 3	C	96	101	parallel
Strand 4	C	110	113	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	63	first strand
Strand 2	C	87	88	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	183	184	first strand
Strand 2	C	219	224	parallel
Strand 3	C	228	233	anti-parallel
Strand 4	C	238	241	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	59	first strand
Strand 2	D	6	10	parallel
Strand 3	D	137	141	parallel
Strand 4	D	161	164	parallel
Strand 5	D	183	184	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	40	first strand
Strand 2	D	14	20	anti-parallel
Strand 3	D	96	100	parallel
Strand 4	D	110	113	anti-parallel
Strand 5	F	31	40	parallel
Strand 6	F	14	21	anti-parallel
Strand 7	F	96	101	parallel
Strand 8	F	110	113	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	64	first strand
Strand 2	D	87	89	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	219	224	first strand
Strand 2	D	228	233	anti-parallel
Strand 3	D	238	241	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	82	first strand
Strand 2	E	57	59	parallel
Strand 3	E	7	10	parallel
Strand 4	E	138	141	parallel
Strand 5	E	161	164	parallel
Strand 6	E	183	184	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	40	first strand
Strand 2	E	14	20	anti-parallel
Strand 3	E	96	101	parallel
Strand 4	E	109	113	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	62	64	first strand
Strand 2	E	87	89	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	219	223	first strand
Strand 2	E	229	233	anti-parallel
Strand 3	E	238	241	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	81	82	first strand
Strand 2	F	57	60	parallel
Strand 3	F	8	10	parallel
Strand 4	F	138	140	parallel
Strand 5	F	161	162	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	219	223	first strand
Strand 2	F	229	233	anti-parallel
Strand 3	F	238	241	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	59	first strand
Strand 2	G	7	10	parallel
Strand 3	G	137	140	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	62	64	first strand
Strand 2	G	87	89	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	7	10	parallel
Strand 3	H	138	140	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	39	first strand
Strand 2	H	14	20	anti-parallel
Strand 3	H	95	99	parallel
Strand 4	H	110	113	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	62	64	first strand
Strand 2	H	87	89	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7VVA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7VVA