Analysis of interatomic Contacts of Structural Units in PDB entry:
7VWC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VWC entry

There are 2 chains in PDB entry 7VWC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 68ALA 725
B
 ASN 68LEU 720
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 7VWC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 83Right-handed alpha
Helix 2
AA2
A
88 95Right-handed alpha
Helix 3
AA3
A
95 106Right-handed alpha
Helix 4
AA4
A
107 124Right-handed alpha
Helix 5
AA5
A
126 139Right-handed alpha
Helix 6
AA6
A
141 147Right-handed alpha
Helix 7
AA7
A
148 175Right-handed alpha
Helix 8
AA8
A
200 217Right-handed alpha
Helix 9
AA9
A
217 235Right-handed alpha
Helix 10
AB1
A
242 251Right-handed alpha
Helix 11
AB2
A
252 256Right-handed 310
Helix 12
AB3
A
263 268Right-handed alpha
Helix 13
AB4
A
268 285Right-handed alpha
Helix 14
AB5
A
291 297Right-handed alpha
Helix 15
AB6
A
298 308Right-handed alpha
Helix 16
AB7
A
312 316Right-handed 310
Helix 17
AB8
A
324 337Right-handed alpha
Helix 18
AB9
A
338 343Right-handed alpha
Helix 19
AC1
A
344 354Right-handed alpha
Helix 20
AC2
A
374 380Right-handed alpha
Helix 21
AC3
A
385 390Right-handed alpha
Helix 22
AC4
A
407 430Right-handed alpha
Helix 23
AC5
A
513 522Right-handed alpha
Helix 24
AC6
A
535 537Right-handed 310
Helix 25
AC7
A
552 558Right-handed alpha
Helix 26
AC8
A
562 570Right-handed alpha
Helix 27
AC9
A
575 580Right-handed alpha
Helix 28
AD1
A
585 589Right-handed 310
Helix 29
AD2
A
600 604Right-handed 310
Helix 30
AD3
A
606 622Right-handed alpha
Helix 31
AD4
A
636 649Right-handed alpha
Helix 32
AD5
A
660 666Right-handed 310
Helix 33
AD6
A
692 700Right-handed alpha
Helix 34
AD7
A
706 711Right-handed alpha
Helix 35
AD8
A
713 723Right-handed alpha
Helix 36
AD9
B
70 83Right-handed alpha
Helix 37
AE1
B
88 94Right-handed alpha
Helix 38
AE2
B
95 100Right-handed alpha
Helix 39
AE3
B
107 124Right-handed alpha
Helix 40
AE4
B
127 135Right-handed alpha
Helix 41
AE5
B
135 140Right-handed alpha
Helix 42
AE6
B
140 148Right-handed alpha
Helix 43
AE7
B
151 168Right-handed alpha
Helix 44
AE8
B
170 175Right-handed alpha
Helix 45
AE9
B
180 185Right-handed alpha
Helix 46
AF1
B
194 199Right-handed alpha
Helix 47
AF2
B
204 209Right-handed alpha
Helix 48
AF3
B
212 217Right-handed alpha
Helix 49
AF4
B
217 234Right-handed alpha
Helix 50
AF5
B
241 255Right-handed alpha
Helix 51
AF6
B
258 260Right-handed 310
Helix 52
AF7
B
261 270Right-handed alpha
Helix 53
AF8
B
278 283Right-handed alpha
Helix 54
AF9
B
283 289Right-handed alpha
Helix 55
AG1
B
289 297Right-handed alpha
Helix 56
AG2
B
298 312Right-handed alpha
Helix 57
AG3
B
316 321Right-handed alpha
Helix 58
AG4
B
327 337Right-handed alpha
Helix 59
AG5
B
338 343Right-handed alpha
Helix 60
AG6
B
348 353Right-handed alpha
Helix 61
AG7
B
385 391Right-handed alpha
Helix 62
AG8
B
391 396Right-handed alpha
Helix 63
AG9
B
402 406Right-handed 310
Helix 64
AH1
B
410 429Right-handed alpha
Helix 65
AH2
B
430 432Right-handed 310
Helix 66
AH3
B
514 521Right-handed alpha
Helix 67
AH4
B
535 537Right-handed 310
Helix 68
AH5
B
552 557Right-handed alpha
Helix 69
AH6
B
562 570Right-handed alpha
Helix 70
AH7
B
575 583Right-handed alpha
Helix 71
AH8
B
585 589Right-handed 310
Helix 72
AH9
B
600 604Right-handed 310
Helix 73
AI1
B
606 622Right-handed alpha
Helix 74
AI2
B
636 651Right-handed alpha
Helix 75
AI3
B
660 664Right-handed 310
Helix 76
AI4
B
685 690Right-handed alpha
Helix 77
AI5
B
693 702Right-handed alpha
Helix 78
AI6
B
705 713Right-handed alpha
Helix 79
AI7
B
714 716Right-handed 310
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There are 7 sheets in PDB entry 7VWC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 497first strand
Strand 2
A
474 477anti-parallel
Strand 3
A
530 531anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 482first strand
Strand 2
A
488 490anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
503 506first strand
Strand 2
A
669 672parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 542first strand
Strand 2
A
625 628parallel
Strand 3
A
653 656parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
467 469first strand
Strand 2
B
531 533parallel
Strand 3
B
475 476anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
505 506first strand
Strand 2
B
669 673parallel
Strand 3
B
679 683anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
539 542first strand
Strand 2
B
625 628parallel
Strand 3
B
653 655parallel
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