Analysis of interatomic Contacts of Structural Units in PDB entry:
7VWK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VWK entry

There are 2 chains in PDB entry 7VWK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 915PRO 1174
B
 ASP 915PRO 1174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7VWK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
958 971Right-handed alpha
Helix 2
AA2
A
1034 1041Right-handed alpha
Helix 3
AA3
A
1055 1067Right-handed alpha
Helix 4
AA4
A
1099 1110Right-handed alpha
Helix 5
AA5
A
1111 1114Right-handed 310
Helix 6
AA6
B
958 971Right-handed alpha
Helix 7
AA7
B
1034 1041Right-handed alpha
Helix 8
AA8
B
1099 1110Right-handed alpha
Helix 9
AA9
B
1111 1114Right-handed 310
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There are 4 sheets in PDB entry 7VWK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
922 925first strand
Strand 2
A
932 938anti-parallel
Strand 3
A
994 1001anti-parallel
Strand 4
A
1004 1011anti-parallel
Strand 5
A
1023 1031anti-parallel
Strand 6
A
978 984anti-parallel
Strand 7
A
1125 1131anti-parallel
Strand 8
A
1164 1172anti-parallel
Strand 9
A
1152 1158anti-parallel
Strand 10
A
1138 1145anti-parallel
Strand 11
A
1086 1092anti-parallel
Strand 12
A
1076 1082anti-parallel
Strand 13
A
1052 1053anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
950 951first strand
Strand 2
A
954 955anti-parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
922 925first strand
Strand 2
B
932 938anti-parallel
Strand 3
B
994 1001anti-parallel
Strand 4
B
1004 1011anti-parallel
Strand 5
B
1023 1031anti-parallel
Strand 6
B
978 984anti-parallel
Strand 7
B
1125 1131anti-parallel
Strand 8
B
1164 1172anti-parallel
Strand 9
B
1152 1158anti-parallel
Strand 10
B
1138 1145anti-parallel
Strand 11
B
1086 1092anti-parallel
Strand 12
B
1076 1082anti-parallel
Strand 13
B
1052 1053anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
955 956first strand
Strand 2
B
989 990anti-parallel
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