Analysis of interatomic Contacts of Structural Units in PDB entry:
7VX8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VX8 entry

There are 2 chains in PDB entry 7VX8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 64ASP 685
A
 LYS 64ASP 685
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7VX8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
68 83Right-handed alpha
Helix 2
AA2
B
88 112Right-handed alpha
Helix 3
AA3
B
115 120Right-handed alpha
Helix 4
AA4
B
126 138Right-handed alpha
Helix 5
AA5
B
141 175Right-handed alpha
Helix 6
AA6
B
178 186Right-handed alpha
Helix 7
AA7
B
192 215Right-handed alpha
Helix 8
AA8
B
216 237Right-handed alpha
Helix 9
AA9
B
241 254Right-handed alpha
Helix 10
AB1
B
255 260Right-handed alpha
Helix 11
AB2
B
267 289Right-handed alpha
Helix 12
AB3
B
289 297Right-handed alpha
Helix 13
AB4
B
298 332Right-handed alpha
Helix 14
AB5
B
339 344Right-handed alpha
Helix 15
AB6
B
384 389Right-handed alpha
Helix 16
AB7
B
391 404Right-handed alpha
Helix 17
AB8
B
405 430Right-handed alpha
Helix 18
AB9
B
514 521Right-handed alpha
Helix 19
AC1
B
535 537Right-handed 310
Helix 20
AC2
B
552 558Right-handed alpha
Helix 21
AC3
B
562 569Right-handed alpha
Helix 22
AC4
B
574 583Right-handed alpha
Helix 23
AC5
B
585 590Right-handed alpha
Helix 24
AC6
B
593 597Right-handed 310
Helix 25
AC7
B
600 605Right-handed alpha
Helix 26
AC8
B
610 622Right-handed alpha
Helix 27
AC9
B
636 650Right-handed alpha
Helix 28
AD1
B
663 667Right-handed 310
Helix 29
AD2
A
68 83Right-handed alpha
Helix 30
AD3
A
88 112Right-handed alpha
Helix 31
AD4
A
115 120Right-handed alpha
Helix 32
AD5
A
126 138Right-handed alpha
Helix 33
AD6
A
141 175Right-handed alpha
Helix 34
AD7
A
178 186Right-handed alpha
Helix 35
AD8
A
192 215Right-handed alpha
Helix 36
AD9
A
216 237Right-handed alpha
Helix 37
AE1
A
241 254Right-handed alpha
Helix 38
AE2
A
267 289Right-handed alpha
Helix 39
AE3
A
289 297Right-handed alpha
Helix 40
AE4
A
298 332Right-handed alpha
Helix 41
AE5
A
339 344Right-handed alpha
Helix 42
AE6
A
384 389Right-handed alpha
Helix 43
AE7
A
391 404Right-handed alpha
Helix 44
AE8
A
405 430Right-handed alpha
Helix 45
AE9
A
514 521Right-handed alpha
Helix 46
AF1
A
535 537Right-handed 310
Helix 47
AF2
A
552 558Right-handed alpha
Helix 48
AF3
A
562 569Right-handed alpha
Helix 49
AF4
A
574 583Right-handed alpha
Helix 50
AF5
A
585 590Right-handed alpha
Helix 51
AF6
A
593 597Right-handed 310
Helix 52
AF7
A
600 605Right-handed alpha
Helix 53
AF8
A
610 622Right-handed alpha
Helix 54
AF9
A
636 650Right-handed alpha
Helix 55
AG1
A
663 667Right-handed 310
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There are 6 sheets in PDB entry 7VX8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 469first strand
Strand 2
B
530 533parallel
Strand 3
B
475 477anti-parallel
Strand 4
B
495 496anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
481 482first strand
Strand 2
B
488 490anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
539 542first strand
Strand 2
B
625 629parallel
Strand 3
B
653 657parallel
Strand 4
B
503 506parallel
Strand 5
B
669 673parallel
Strand 6
B
679 683anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
530 533parallel
Strand 3
A
475 477anti-parallel
Strand 4
A
495 496anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 482first strand
Strand 2
A
488 490anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 542first strand
Strand 2
A
625 629parallel
Strand 3
A
653 657parallel
Strand 4
A
503 506parallel
Strand 5
A
669 673parallel
Strand 6
A
679 683anti-parallel
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