Analysis of interatomic Contacts of Structural Units in PDB entry:
7VXC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7VXC entry

There are 4 chains in PDB entry 7VXC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	GLN 14	SER 1147
C	SER 19	ASP 615
A	GLN 14	SER 1147
B	GLN 14	SER 1147

There are 95 helices in PDB entry 7VXC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	294	304	Right-handed alpha
Helix 2	AA2	D	337	344	Right-handed alpha
Helix 3	AA3	D	365	371	Right-handed alpha
Helix 4	AA4	D	386	390	Right-handed 310
Helix 5	AA5	D	406	410	Right-handed 310
Helix 6	AA6	D	416	422	Right-handed alpha
Helix 7	AA7	D	737	743	Right-handed alpha
Helix 8	AA8	D	746	755	Right-handed alpha
Helix 9	AA9	D	757	780	Right-handed alpha
Helix 10	AB1	D	816	826	Right-handed alpha
Helix 11	AB2	D	849	856	Right-handed alpha
Helix 12	AB3	D	866	885	Right-handed alpha
Helix 13	AB4	D	897	909	Right-handed alpha
Helix 14	AB5	D	913	941	Right-handed alpha
Helix 15	AB6	D	945	965	Right-handed alpha
Helix 16	AB7	D	966	968	Right-handed 310
Helix 17	AB8	D	976	982	Right-handed alpha
Helix 18	AB9	D	985	1032	Right-handed alpha
Helix 19	AC1	D	1142	1147	Right-handed 310
Helix 20	AC2	C	20	53	Right-handed alpha
Helix 21	AC3	C	55	81	Right-handed alpha
Helix 22	AC4	C	84	88	Right-handed 310
Helix 23	AC5	C	90	101	Right-handed alpha
Helix 24	AC6	C	103	108	Right-handed 310
Helix 25	AC7	C	109	130	Right-handed alpha
Helix 26	AC8	C	146	155	Right-handed alpha
Helix 27	AC9	C	157	172	Right-handed alpha
Helix 28	AD1	C	175	194	Right-handed alpha
Helix 29	AD2	C	198	205	Right-handed alpha
Helix 30	AD3	C	206	208	Right-handed 310
Helix 31	AD4	C	220	248	Right-handed alpha
Helix 32	AD5	C	275	280	Right-handed 310
Helix 33	AD6	C	293	301	Right-handed alpha
Helix 34	AD7	C	303	318	Right-handed alpha
Helix 35	AD8	C	324	330	Right-handed alpha
Helix 36	AD9	C	365	385	Right-handed alpha
Helix 37	AE1	C	386	388	Right-handed 310
Helix 38	AE2	C	399	413	Right-handed alpha
Helix 39	AE3	C	414	422	Right-handed alpha
Helix 40	AE4	C	431	447	Right-handed alpha
Helix 41	AE5	C	448	465	Right-handed alpha
Helix 42	AE6	C	469	471	Right-handed 310
Helix 43	AE7	C	472	485	Right-handed alpha
Helix 44	AE8	C	498	503	Right-handed alpha
Helix 45	AE9	C	503	508	Right-handed alpha
Helix 46	AF1	C	513	533	Right-handed alpha
Helix 47	AF2	C	538	542	Right-handed 310
Helix 48	AF3	C	548	559	Right-handed alpha
Helix 49	AF4	C	565	572	Right-handed alpha
Helix 50	AF5	C	581	588	Right-handed alpha
Helix 51	AF6	C	588	599	Right-handed alpha
Helix 52	AF7	A	294	304	Right-handed alpha
Helix 53	AF8	A	337	344	Right-handed alpha
Helix 54	AF9	A	365	372	Right-handed alpha
Helix 55	AG1	A	383	388	Right-handed alpha
Helix 56	AG2	A	404	408	Right-handed alpha
Helix 57	AG3	A	416	422	Right-handed alpha
Helix 58	AG4	A	737	743	Right-handed alpha
Helix 59	AG5	A	746	754	Right-handed alpha
Helix 60	AG6	A	755	757	Right-handed 310
Helix 61	AG7	A	758	782	Right-handed alpha
Helix 62	AG8	A	816	826	Right-handed alpha
Helix 63	AG9	A	849	856	Right-handed alpha
Helix 64	AH1	A	866	884	Right-handed alpha
Helix 65	AH2	A	897	909	Right-handed alpha
Helix 66	AH3	A	913	941	Right-handed alpha
Helix 67	AH4	A	942	944	Right-handed 310
Helix 68	AH5	A	945	965	Right-handed alpha
Helix 69	AH6	A	976	984	Right-handed alpha
Helix 70	AH7	A	985	1033	Right-handed alpha
Helix 71	AH8	A	1116	1118	Right-handed 310
Helix 72	AH9	A	1140	1145	Right-handed alpha
Helix 73	AI1	B	294	304	Right-handed alpha
Helix 74	AI2	B	337	341	Right-handed 310
Helix 75	AI3	B	364	371	Right-handed alpha
Helix 76	AI4	B	383	388	Right-handed alpha
Helix 77	AI5	B	405	410	Right-handed 310
Helix 78	AI6	B	416	422	Right-handed alpha
Helix 79	AI7	B	502	505	Right-handed 310
Helix 80	AI8	B	737	743	Right-handed alpha
Helix 81	AI9	B	746	754	Right-handed alpha
Helix 82	AJ1	B	755	757	Right-handed 310
Helix 83	AJ2	B	758	780	Right-handed alpha
Helix 84	AJ3	B	817	825	Right-handed alpha
Helix 85	AJ4	B	849	856	Right-handed alpha
Helix 86	AJ5	B	866	885	Right-handed alpha
Helix 87	AJ6	B	897	910	Right-handed alpha
Helix 88	AJ7	B	912	941	Right-handed alpha
Helix 89	AJ8	B	942	944	Right-handed 310
Helix 90	AJ9	B	945	965	Right-handed alpha
Helix 91	AK1	B	966	968	Right-handed 310
Helix 92	AK2	B	976	984	Right-handed alpha
Helix 93	AK3	B	985	1032	Right-handed alpha
Helix 94	AK4	B	1116	1118	Right-handed 310
Helix 95	AK5	B	1140	1145	Right-handed alpha

There are 52 sheets in PDB entry 7VXC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	29	first strand
Strand 2	D	62	67	anti-parallel
Strand 3	D	263	269	anti-parallel
Strand 4	D	89	95	anti-parallel
Strand 5	D	186	197	anti-parallel
Strand 6	D	200	212	anti-parallel
Strand 7	D	224	229	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	44	first strand
Strand 2	A	566	567	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	55	first strand
Strand 2	D	271	279	anti-parallel
Strand 3	D	285	287	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	84	first strand
Strand 2	D	237	246	anti-parallel
Strand 3	D	101	107	anti-parallel
Strand 4	D	116	121	anti-parallel
Strand 5	D	126	133	anti-parallel
Strand 6	D	163	171	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	144	first strand
Strand 2	D	237	246	parallel
Strand 3	D	259	260	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	311	319	first strand
Strand 2	D	592	599	anti-parallel
Strand 3	D	609	612	anti-parallel
Strand 4	D	649	651	anti-parallel
Strand 5	D	642	644	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	324	328	first strand
Strand 2	D	538	543	parallel
Strand 3	D	546	554	anti-parallel
Strand 4	D	584	588	anti-parallel
Strand 5	D	575	577	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	358	first strand
Strand 2	D	394	402	anti-parallel
Strand 3	D	508	516	anti-parallel
Strand 4	D	432	437	anti-parallel
Strand 5	D	376	379	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	454	first strand
Strand 2	D	492	494	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	474	first strand
Strand 2	D	488	489	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	654	655	first strand
Strand 2	D	691	696	parallel
Strand 3	D	670	675	anti-parallel
Strand 4	D	664	665	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	711	713	first strand
Strand 2	D	1074	1076	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	718	728	first strand
Strand 2	D	1059	1069	anti-parallel
Strand 3	D	1047	1056	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	735	736	first strand
Strand 2	D	858	859	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	788	789	first strand
Strand 2	A	702	703	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1120	1122	first strand
Strand 2	D	1087	1090	anti-parallel
Strand 3	D	1081	1082	anti-parallel
Strand 4	D	1133	1134	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1094	1097	first strand
Strand 2	D	1102	1105	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	141	143	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	487	488	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	352	first strand
Strand 2	C	355	359	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	31	first strand
Strand 2	A	60	67	anti-parallel
Strand 3	A	263	269	anti-parallel
Strand 4	A	89	95	anti-parallel
Strand 5	A	186	197	anti-parallel
Strand 6	A	200	212	anti-parallel
Strand 7	A	224	229	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	B	565	566	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	243	anti-parallel
Strand 3	A	140	142	parallel
Strand 4	A	156	157	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	243	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	125	133	anti-parallel
Strand 6	A	163	174	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	612	anti-parallel
Strand 4	A	649	651	anti-parallel
Strand 5	A	642	644	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	328	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	575	577	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	403	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	432	437	anti-parallel
Strand 5	A	376	379	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	660	first strand
Strand 2	A	691	697	parallel
Strand 3	A	670	675	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	715	first strand
Strand 2	A	1072	1077	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	728	first strand
Strand 2	A	1059	1069	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	736	first strand
Strand 2	A	858	860	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	787	789	first strand
Strand 2	B	701	703	parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1087	1090	anti-parallel
Strand 3	A	1081	1082	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 7 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	60	67	anti-parallel
Strand 3	B	263	269	anti-parallel
Strand 4	B	89	95	anti-parallel
Strand 5	B	186	197	anti-parallel
Strand 6	B	200	212	anti-parallel
Strand 7	B	224	229	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	85	first strand
Strand 2	B	237	244	anti-parallel
Strand 3	B	140	142	parallel
Strand 4	B	156	157	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	85	first strand
Strand 2	B	237	244	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	116	121	anti-parallel
Strand 5	B	126	133	anti-parallel
Strand 6	B	163	171	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	612	anti-parallel
Strand 4	B	649	651	anti-parallel
Strand 5	B	642	644	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	328	first strand
Strand 2	B	538	543	parallel
Strand 3	B	546	554	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	575	577	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	394	403	anti-parallel
Strand 3	B	507	516	anti-parallel
Strand 4	B	432	437	anti-parallel
Strand 5	B	376	379	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	488	489	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	691	696	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	715	first strand
Strand 2	B	1072	1076	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	728	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	734	736	first strand
Strand 2	B	858	860	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	807	808	first strand
Strand 2	B	815	816	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1087	1090	anti-parallel
Strand 3	B	1081	1082	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1097	first strand
Strand 2	B	1102	1105	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7VXC

Analysis of interatomic Contacts of Structural Units in PDB entry:
7VXC