Analysis of interatomic Contacts of Structural Units in PDB entry:
7VXE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VXE entry

There are 3 chains in PDB entry 7VXE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 14SER 1147
B
GLN 14SER 1147
C
GLN 14SER 1147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7VXE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
294 304Right-handed alpha
Helix 2
AA2
A
365 371Right-handed alpha
Helix 3
AA3
A
385 390Right-handed alpha
Helix 4
AA4
A
403 407Right-handed 310
Helix 5
AA5
A
416 421Right-handed alpha
Helix 6
AA6
A
737 743Right-handed alpha
Helix 7
AA7
A
746 755Right-handed alpha
Helix 8
AA8
A
758 783Right-handed alpha
Helix 9
AA9
A
816 825Right-handed alpha
Helix 10
AB1
A
866 885Right-handed alpha
Helix 11
AB2
A
886 891Right-handed alpha
Helix 12
AB3
A
897 909Right-handed alpha
Helix 13
AB4
A
913 941Right-handed alpha
Helix 14
AB5
A
942 944Right-handed 310
Helix 15
AB6
A
945 965Right-handed alpha
Helix 16
AB7
A
966 968Right-handed 310
Helix 17
AB8
A
976 982Right-handed alpha
Helix 18
AB9
A
985 1032Right-handed alpha
Helix 19
AC1
A
1140 1147Right-handed alpha
Helix 20
AC2
B
294 304Right-handed alpha
Helix 21
AC3
B
365 371Right-handed alpha
Helix 22
AC4
B
384 388Right-handed 310
Helix 23
AC5
B
405 407Right-handed 310
Helix 24
AC6
B
737 743Right-handed alpha
Helix 25
AC7
B
746 755Right-handed alpha
Helix 26
AC8
B
758 782Right-handed alpha
Helix 27
AC9
B
816 826Right-handed alpha
Helix 28
AD1
B
866 885Right-handed alpha
Helix 29
AD2
B
886 891Right-handed alpha
Helix 30
AD3
B
897 909Right-handed alpha
Helix 31
AD4
B
913 941Right-handed alpha
Helix 32
AD5
B
945 965Right-handed alpha
Helix 33
AD6
B
966 968Right-handed 310
Helix 34
AD7
B
976 982Right-handed alpha
Helix 35
AD8
B
985 1032Right-handed alpha
Helix 36
AD9
B
1140 1147Right-handed alpha
Helix 37
AE1
C
294 304Right-handed alpha
Helix 38
AE2
C
337 344Right-handed alpha
Helix 39
AE3
C
364 371Right-handed alpha
Helix 40
AE4
C
383 388Right-handed alpha
Helix 41
AE5
C
403 410Right-handed 310
Helix 42
AE6
C
416 422Right-handed alpha
Helix 43
AE7
C
502 506Right-handed 310
Helix 44
AE8
C
737 743Right-handed alpha
Helix 45
AE9
C
746 755Right-handed alpha
Helix 46
AF1
C
758 782Right-handed alpha
Helix 47
AF2
C
817 825Right-handed alpha
Helix 48
AF3
C
866 883Right-handed alpha
Helix 49
AF4
C
897 909Right-handed alpha
Helix 50
AF5
C
913 941Right-handed alpha
Helix 51
AF6
C
945 965Right-handed alpha
Helix 52
AF7
C
966 968Right-handed 310
Helix 53
AF8
C
976 984Right-handed alpha
Helix 54
AF9
C
985 1033Right-handed alpha
Helix 55
AG1
C
1140 1145Right-handed alpha
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There are 46 sheets in PDB entry 7VXE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
28 30first strand
Strand 2
A
61 67anti-parallel
Strand 3
A
263 269anti-parallel
Strand 4
A
89 96anti-parallel
Strand 5
A
188 197anti-parallel
Strand 6
A
200 206anti-parallel
Strand 7
A
224 229anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
42 43first strand
Strand 2
C
565 566parallel
Strand 3
C
575 577anti-parallel
Strand 4
C
584 588anti-parallel
Strand 5
C
546 554anti-parallel
Strand 6
C
538 543anti-parallel
Strand 7
C
325 328parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 55first strand
Strand 2
A
271 279anti-parallel
Strand 3
A
285 290anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
84 85first strand
Strand 2
A
237 246anti-parallel
Strand 3
A
141 144parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
84 85first strand
Strand 2
A
237 246anti-parallel
Strand 3
A
101 107anti-parallel
Strand 4
A
116 121anti-parallel
Strand 5
A
126 135anti-parallel
Strand 6
A
160 171anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
311 317first strand
Strand 2
A
594 599anti-parallel
Strand 3
A
609 613anti-parallel
Strand 4
A
648 651anti-parallel
Strand 5
A
642 644anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
325 328first strand
Strand 2
A
538 543parallel
Strand 3
A
546 554anti-parallel
Strand 4
A
584 588anti-parallel
Strand 5
A
573 577anti-parallel
Strand 6
A
566 567anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
354 358first strand
Strand 2
A
395 402anti-parallel
Strand 3
A
508 515anti-parallel
Strand 4
A
431 437anti-parallel
Strand 5
A
376 379anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
452 454first strand
Strand 2
A
492 494anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
473 474first strand
Strand 2
A
488 489anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
654 655first strand
Strand 2
A
691 696parallel
Strand 3
A
670 675anti-parallel
Strand 4
A
664 667anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
702 704first strand
Strand 2
B
788 790parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
711 715first strand
Strand 2
A
1072 1077anti-parallel
Strand 3
A
1094 1097anti-parallel
Strand 4
A
1102 1105anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
718 728first strand
Strand 2
A
1059 1069anti-parallel
Strand 3
A
1047 1056anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
734 736first strand
Strand 2
A
858 860anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
787 790first strand
Strand 2
C
701 704parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1120 1122first strand
Strand 2
A
1087 1090anti-parallel
Strand 3
A
1081 1082anti-parallel
Strand 4
A
1133 1134parallel
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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
28 31first strand
Strand 2
B
60 67anti-parallel
Strand 3
B
263 269anti-parallel
Strand 4
B
89 96anti-parallel
Strand 5
B
188 197anti-parallel
Strand 6
B
200 208anti-parallel
Strand 7
B
224 229anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
48 55first strand
Strand 2
B
271 279anti-parallel
Strand 3
B
285 290anti-parallel
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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
84 85first strand
Strand 2
B
237 241anti-parallel
Strand 3
B
103 107anti-parallel
Strand 4
B
116 121anti-parallel
Strand 5
B
126 135anti-parallel
Strand 6
B
160 171anti-parallel
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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
311 317first strand
Strand 2
B
594 599anti-parallel
Strand 3
B
609 613anti-parallel
Strand 4
B
648 651anti-parallel
Strand 5
B
642 644anti-parallel
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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
325 328first strand
Strand 2
B
538 543parallel
Strand 3
B
546 554anti-parallel
Strand 4
B
584 589anti-parallel
Strand 5
B
573 577anti-parallel
Strand 6
B
566 567anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
354 358first strand
Strand 2
B
394 403anti-parallel
Strand 3
B
507 516anti-parallel
Strand 4
B
431 437anti-parallel
Strand 5
B
376 379anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
452 454first strand
Strand 2
B
492 494anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
473 474first strand
Strand 2
B
488 489anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
654 655first strand
Strand 2
B
691 696parallel
Strand 3
B
670 675anti-parallel
Strand 4
B
664 667anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
702 704first strand
Strand 2
C
788 790parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
711 715first strand
Strand 2
B
1072 1076anti-parallel
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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
718 728first strand
Strand 2
B
1059 1069anti-parallel
Strand 3
B
1047 1056anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
734 736first strand
Strand 2
B
858 860anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1120 1122first strand
Strand 2
B
1087 1090anti-parallel
Strand 3
B
1081 1082anti-parallel
Strand 4
B
1133 1134parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1094 1097first strand
Strand 2
B
1102 1105anti-parallel
Strand 3
B
1113 1114anti-parallel
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There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
27 31first strand
Strand 2
C
60 67anti-parallel
Strand 3
C
263 269anti-parallel
Strand 4
C
89 96anti-parallel
Strand 5
C
188 197anti-parallel
Strand 6
C
200 208anti-parallel
Strand 7
C
224 229anti-parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
48 55first strand
Strand 2
C
271 279anti-parallel
Strand 3
C
285 290anti-parallel
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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
84 85first strand
Strand 2
C
237 242anti-parallel
Strand 3
C
101 107anti-parallel
Strand 4
C
116 121anti-parallel
Strand 5
C
126 135anti-parallel
Strand 6
C
160 171anti-parallel
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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
311 319first strand
Strand 2
C
592 599anti-parallel
Strand 3
C
609 613anti-parallel
Strand 4
C
648 651anti-parallel
Strand 5
C
642 644anti-parallel
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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
354 358first strand
Strand 2
C
394 402anti-parallel
Strand 3
C
508 516anti-parallel
Strand 4
C
432 437anti-parallel
Strand 5
C
376 379anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
391 392first strand
Strand 2
C
524 525anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
452 454first strand
Strand 2
C
492 494anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
473 474first strand
Strand 2
C
488 489anti-parallel
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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
654 655first strand
Strand 2
C
691 696parallel
Strand 3
C
670 675anti-parallel
Strand 4
C
664 667anti-parallel
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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
711 715first strand
Strand 2
C
1072 1077anti-parallel
Strand 3
C
1094 1097anti-parallel
Strand 4
C
1102 1105anti-parallel
Strand 5
C
1113 1114anti-parallel
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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
718 728first strand
Strand 2
C
1059 1069anti-parallel
Strand 3
C
1047 1056anti-parallel
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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
734 736first strand
Strand 2
C
858 860anti-parallel
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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
807 808first strand
Strand 2
C
815 816anti-parallel
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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1120 1122first strand
Strand 2
C
1087 1090anti-parallel
Strand 3
C
1081 1082anti-parallel
Strand 4
C
1133 1134parallel
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