Analysis of interatomic Contacts of Structural Units in PDB entry:
7VXF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7VXF entry

There are 4 chains in PDB entry 7VXF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	SER 1161
C	SER 19	ASP 615
B	GLN 14	SER 1161
D	GLN 14	SER 1161

There are 97 helices in PDB entry 7VXF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	338	343	Right-handed alpha
Helix 3	AA3	A	365	371	Right-handed alpha
Helix 4	AA4	A	386	389	Right-handed 310
Helix 5	AA5	A	403	407	Right-handed 310
Helix 6	AA6	A	416	422	Right-handed alpha
Helix 7	AA7	A	737	743	Right-handed alpha
Helix 8	AA8	A	746	755	Right-handed alpha
Helix 9	AA9	A	758	780	Right-handed alpha
Helix 10	AB1	A	818	825	Right-handed alpha
Helix 11	AB2	A	849	854	Right-handed alpha
Helix 12	AB3	A	866	884	Right-handed alpha
Helix 13	AB4	A	897	909	Right-handed alpha
Helix 14	AB5	A	913	919	Right-handed alpha
Helix 15	AB6	A	919	941	Right-handed alpha
Helix 16	AB7	A	942	944	Right-handed 310
Helix 17	AB8	A	945	965	Right-handed alpha
Helix 18	AB9	A	966	968	Right-handed 310
Helix 19	AC1	A	976	982	Right-handed alpha
Helix 20	AC2	A	985	1033	Right-handed alpha
Helix 21	AC3	A	1140	1154	Right-handed alpha
Helix 22	AC4	A	1155	1160	Right-handed alpha
Helix 23	AC5	C	20	53	Right-handed alpha
Helix 24	AC6	C	55	81	Right-handed alpha
Helix 25	AC7	C	84	88	Right-handed 310
Helix 26	AC8	C	90	102	Right-handed alpha
Helix 27	AC9	C	103	108	Right-handed 310
Helix 28	AD1	C	109	130	Right-handed alpha
Helix 29	AD2	C	146	155	Right-handed alpha
Helix 30	AD3	C	157	172	Right-handed alpha
Helix 31	AD4	C	176	194	Right-handed alpha
Helix 32	AD5	C	198	205	Right-handed alpha
Helix 33	AD6	C	206	208	Right-handed 310
Helix 34	AD7	C	220	250	Right-handed alpha
Helix 35	AD8	C	275	279	Right-handed 310
Helix 36	AD9	C	293	301	Right-handed alpha
Helix 37	AE1	C	303	318	Right-handed alpha
Helix 38	AE2	C	324	330	Right-handed alpha
Helix 39	AE3	C	365	385	Right-handed alpha
Helix 40	AE4	C	386	388	Right-handed 310
Helix 41	AE5	C	389	393	Right-handed 310
Helix 42	AE6	C	399	413	Right-handed alpha
Helix 43	AE7	C	414	421	Right-handed alpha
Helix 44	AE8	C	431	447	Right-handed alpha
Helix 45	AE9	C	448	466	Right-handed alpha
Helix 46	AF1	C	469	471	Right-handed 310
Helix 47	AF2	C	472	485	Right-handed alpha
Helix 48	AF3	C	498	503	Right-handed alpha
Helix 49	AF4	C	503	508	Right-handed alpha
Helix 50	AF5	C	513	533	Right-handed alpha
Helix 51	AF6	C	538	542	Right-handed 310
Helix 52	AF7	C	548	559	Right-handed alpha
Helix 53	AF8	C	565	572	Right-handed alpha
Helix 54	AF9	C	581	588	Right-handed alpha
Helix 55	AG1	C	588	599	Right-handed alpha
Helix 56	AG2	B	294	304	Right-handed alpha
Helix 57	AG3	B	338	344	Right-handed alpha
Helix 58	AG4	B	365	371	Right-handed alpha
Helix 59	AG5	B	386	389	Right-handed 310
Helix 60	AG6	B	403	410	Right-handed 310
Helix 61	AG7	B	416	422	Right-handed alpha
Helix 62	AG8	B	737	743	Right-handed alpha
Helix 63	AG9	B	746	755	Right-handed alpha
Helix 64	AH1	B	758	780	Right-handed alpha
Helix 65	AH2	B	818	825	Right-handed alpha
Helix 66	AH3	B	849	854	Right-handed alpha
Helix 67	AH4	B	866	884	Right-handed alpha
Helix 68	AH5	B	886	891	Right-handed alpha
Helix 69	AH6	B	897	909	Right-handed alpha
Helix 70	AH7	B	913	919	Right-handed alpha
Helix 71	AH8	B	919	941	Right-handed alpha
Helix 72	AH9	B	942	944	Right-handed 310
Helix 73	AI1	B	945	965	Right-handed alpha
Helix 74	AI2	B	976	982	Right-handed alpha
Helix 75	AI3	B	985	1033	Right-handed alpha
Helix 76	AI4	B	1140	1154	Right-handed alpha
Helix 77	AI5	B	1155	1161	Right-handed alpha
Helix 78	AI6	D	294	304	Right-handed alpha
Helix 79	AI7	D	383	390	Right-handed 310
Helix 80	AI8	D	416	422	Right-handed alpha
Helix 81	AI9	D	502	506	Right-handed 310
Helix 82	AJ1	D	737	743	Right-handed alpha
Helix 83	AJ2	D	747	755	Right-handed alpha
Helix 84	AJ3	D	758	780	Right-handed alpha
Helix 85	AJ4	D	818	825	Right-handed alpha
Helix 86	AJ5	D	849	854	Right-handed alpha
Helix 87	AJ6	D	866	884	Right-handed alpha
Helix 88	AJ7	D	886	891	Right-handed alpha
Helix 89	AJ8	D	897	899	Right-handed 310
Helix 90	AJ9	D	900	909	Right-handed alpha
Helix 91	AK1	D	913	941	Right-handed alpha
Helix 92	AK2	D	945	965	Right-handed alpha
Helix 93	AK3	D	966	968	Right-handed 310
Helix 94	AK4	D	976	982	Right-handed alpha
Helix 95	AK5	D	985	1032	Right-handed alpha
Helix 96	AK6	D	1140	1157	Right-handed alpha
Helix 97	AK7	D	1158	1161	Right-handed 310

There are 46 sheets in PDB entry 7VXF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	64	anti-parallel
Strand 3	A	266	267	anti-parallel
Strand 4	A	90	96	anti-parallel
Strand 5	A	188	197	anti-parallel
Strand 6	A	200	205	anti-parallel
Strand 7	A	224	229	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	289	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	239	anti-parallel
Strand 3	A	105	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	131	anti-parallel
Strand 6	A	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	142	first strand
Strand 2	A	156	157	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	318	first strand
Strand 2	A	593	599	anti-parallel
Strand 3	A	609	612	anti-parallel
Strand 4	A	649	651	anti-parallel
Strand 5	A	642	644	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	327	first strand
Strand 2	A	538	542	parallel
Strand 3	A	548	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	573	577	anti-parallel
Strand 6	A	565	567	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	358	first strand
Strand 2	A	394	402	anti-parallel
Strand 3	A	508	516	anti-parallel
Strand 4	A	432	437	anti-parallel
Strand 5	A	376	379	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	392	first strand
Strand 2	A	524	525	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	653	655	first strand
Strand 2	A	691	694	parallel
Strand 3	A	671	675	anti-parallel
Strand 4	A	664	665	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	715	first strand
Strand 2	A	1072	1077	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	728	first strand
Strand 2	A	1059	1069	anti-parallel
Strand 3	A	1047	1056	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	735	736	first strand
Strand 2	A	858	859	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1087	1090	anti-parallel
Strand 3	A	1081	1082	anti-parallel
Strand 4	A	1133	1134	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	141	143	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	487	488	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	352	first strand
Strand 2	C	355	359	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	61	64	anti-parallel
Strand 3	B	264	267	anti-parallel
Strand 4	B	90	96	anti-parallel
Strand 5	B	188	197	anti-parallel
Strand 6	B	200	205	anti-parallel
Strand 7	B	224	230	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	289	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	85	first strand
Strand 2	B	237	239	anti-parallel
Strand 3	B	105	107	anti-parallel
Strand 4	B	116	121	anti-parallel
Strand 5	B	126	131	anti-parallel
Strand 6	B	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	142	first strand
Strand 2	B	156	157	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	318	first strand
Strand 2	B	593	599	anti-parallel
Strand 3	B	609	612	anti-parallel
Strand 4	B	649	651	anti-parallel
Strand 5	B	642	644	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	327	first strand
Strand 2	B	538	542	parallel
Strand 3	B	548	554	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	573	577	anti-parallel
Strand 6	B	565	567	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	355	358	first strand
Strand 2	B	394	402	anti-parallel
Strand 3	B	508	516	anti-parallel
Strand 4	B	432	437	anti-parallel
Strand 5	B	376	379	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	392	first strand
Strand 2	B	524	525	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	653	655	first strand
Strand 2	B	691	694	parallel
Strand 3	B	671	675	anti-parallel
Strand 4	B	664	665	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	715	first strand
Strand 2	B	1072	1077	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	728	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	1047	1056	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	736	first strand
Strand 2	B	858	859	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1087	1090	anti-parallel
Strand 3	B	1081	1082	anti-parallel
Strand 4	B	1133	1134	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	30	first strand
Strand 2	D	61	67	anti-parallel
Strand 3	D	263	269	anti-parallel
Strand 4	D	90	95	anti-parallel
Strand 5	D	189	197	anti-parallel
Strand 6	D	200	208	anti-parallel
Strand 7	D	224	229	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	55	first strand
Strand 2	D	271	279	anti-parallel
Strand 3	D	285	290	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	237	241	anti-parallel
Strand 3	D	103	107	anti-parallel
Strand 4	D	116	121	anti-parallel
Strand 5	D	125	133	anti-parallel
Strand 6	D	163	174	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	142	first strand
Strand 2	D	156	157	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	311	319	first strand
Strand 2	D	592	599	anti-parallel
Strand 3	D	609	612	anti-parallel
Strand 4	D	649	651	anti-parallel
Strand 5	D	642	644	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	324	327	first strand
Strand 2	D	538	543	parallel
Strand 3	D	546	553	anti-parallel
Strand 4	D	584	589	anti-parallel
Strand 5	D	573	577	anti-parallel
Strand 6	D	565	567	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	357	first strand
Strand 2	D	395	402	anti-parallel
Strand 3	D	508	515	anti-parallel
Strand 4	D	432	437	anti-parallel
Strand 5	D	376	379	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	454	first strand
Strand 2	D	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	654	655	first strand
Strand 2	D	691	696	parallel
Strand 3	D	670	675	anti-parallel
Strand 4	D	664	665	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	711	715	first strand
Strand 2	D	1072	1076	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	718	728	first strand
Strand 2	D	1059	1069	anti-parallel
Strand 3	D	1047	1056	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	733	736	first strand
Strand 2	D	858	861	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1120	1122	first strand
Strand 2	D	1087	1090	anti-parallel
Strand 3	D	1081	1082	anti-parallel
Strand 4	D	1133	1134	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1094	1097	first strand
Strand 2	D	1102	1105	anti-parallel
Strand 3	D	1113	1114	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7VXF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7VXF