Analysis of interatomic Contacts of Structural Units in PDB entry:
7VZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7VZ6 entry

There are 8 chains in PDB entry 7VZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER -1	PRO 374
B	SER -1	PRO 374
C	SER -1	PRO 374
D	SER -1	PRO 374
E	SER -1	PRO 374
F	SER -1	PRO 374
G	SER -1	PRO 374
H	SER -1	PRO 374

There are155 helices in PDB entry 7VZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	28	Right-handed alpha
Helix 2	AA2	A	45	53	Right-handed alpha
Helix 3	AA3	A	68	80	Right-handed alpha
Helix 4	AA4	A	80	87	Right-handed alpha
Helix 5	AA5	A	98	111	Right-handed alpha
Helix 6	AA6	A	132	144	Right-handed alpha
Helix 7	AA7	A	151	160	Right-handed alpha
Helix 8	AA8	A	164	166	Right-handed 310
Helix 9	AA9	A	173	184	Right-handed alpha
Helix 10	AB1	A	185	190	Right-handed alpha
Helix 11	AB2	A	191	199	Right-handed alpha
Helix 12	AB3	A	210	214	Right-handed 310
Helix 13	AB4	A	215	232	Right-handed alpha
Helix 14	AB5	A	244	256	Right-handed alpha
Helix 15	AB6	A	268	279	Right-handed alpha
Helix 16	AB7	A	286	296	Right-handed alpha
Helix 17	AB8	A	309	315	Right-handed alpha
Helix 18	AB9	A	324	338	Right-handed alpha
Helix 19	AC1	A	338	345	Right-handed alpha
Helix 20	AC2	A	357	371	Right-handed alpha
Helix 21	AC3	B	11	28	Right-handed alpha
Helix 22	AC4	B	46	53	Right-handed alpha
Helix 23	AC5	B	68	80	Right-handed alpha
Helix 24	AC6	B	80	87	Right-handed alpha
Helix 25	AC7	B	98	111	Right-handed alpha
Helix 26	AC8	B	132	144	Right-handed alpha
Helix 27	AC9	B	151	160	Right-handed alpha
Helix 28	AD1	B	164	166	Right-handed 310
Helix 29	AD2	B	173	183	Right-handed alpha
Helix 30	AD3	B	193	199	Right-handed alpha
Helix 31	AD4	B	210	214	Right-handed 310
Helix 32	AD5	B	215	232	Right-handed alpha
Helix 33	AD6	B	244	256	Right-handed alpha
Helix 34	AD7	B	268	279	Right-handed alpha
Helix 35	AD8	B	286	296	Right-handed alpha
Helix 36	AD9	B	309	315	Right-handed alpha
Helix 37	AE1	B	324	338	Right-handed alpha
Helix 38	AE2	B	338	345	Right-handed alpha
Helix 39	AE3	B	357	371	Right-handed alpha
Helix 40	AE4	C	11	28	Right-handed alpha
Helix 41	AE5	C	46	53	Right-handed alpha
Helix 42	AE6	C	68	80	Right-handed alpha
Helix 43	AE7	C	80	87	Right-handed alpha
Helix 44	AE8	C	98	111	Right-handed alpha
Helix 45	AE9	C	132	144	Right-handed alpha
Helix 46	AF1	C	151	160	Right-handed alpha
Helix 47	AF2	C	164	166	Right-handed 310
Helix 48	AF3	C	173	183	Right-handed alpha
Helix 49	AF4	C	193	199	Right-handed alpha
Helix 50	AF5	C	210	214	Right-handed 310
Helix 51	AF6	C	215	232	Right-handed alpha
Helix 52	AF7	C	244	256	Right-handed alpha
Helix 53	AF8	C	268	279	Right-handed alpha
Helix 54	AF9	C	286	296	Right-handed alpha
Helix 55	AG1	C	309	315	Right-handed alpha
Helix 56	AG2	C	324	338	Right-handed alpha
Helix 57	AG3	C	338	345	Right-handed alpha
Helix 58	AG4	C	357	371	Right-handed alpha
Helix 59	AG5	D	11	28	Right-handed alpha
Helix 60	AG6	D	46	53	Right-handed alpha
Helix 61	AG7	D	68	80	Right-handed alpha
Helix 62	AG8	D	80	87	Right-handed alpha
Helix 63	AG9	D	98	111	Right-handed alpha
Helix 64	AH1	D	132	144	Right-handed alpha
Helix 65	AH2	D	151	160	Right-handed alpha
Helix 66	AH3	D	164	166	Right-handed 310
Helix 67	AH4	D	173	183	Right-handed alpha
Helix 68	AH5	D	193	199	Right-handed alpha
Helix 69	AH6	D	210	214	Right-handed 310
Helix 70	AH7	D	215	232	Right-handed alpha
Helix 71	AH8	D	244	256	Right-handed alpha
Helix 72	AH9	D	268	279	Right-handed alpha
Helix 73	AI1	D	286	296	Right-handed alpha
Helix 74	AI2	D	309	315	Right-handed alpha
Helix 75	AI3	D	324	338	Right-handed alpha
Helix 76	AI4	D	338	344	Right-handed alpha
Helix 77	AI5	D	357	371	Right-handed alpha
Helix 78	AI6	E	11	28	Right-handed alpha
Helix 79	AI7	E	44	53	Right-handed alpha
Helix 80	AI8	E	68	80	Right-handed alpha
Helix 81	AI9	E	80	87	Right-handed alpha
Helix 82	AJ1	E	98	111	Right-handed alpha
Helix 83	AJ2	E	132	144	Right-handed alpha
Helix 84	AJ3	E	151	160	Right-handed alpha
Helix 85	AJ4	E	164	166	Right-handed 310
Helix 86	AJ5	E	173	184	Right-handed alpha
Helix 87	AJ6	E	185	190	Right-handed alpha
Helix 88	AJ7	E	191	199	Right-handed alpha
Helix 89	AJ8	E	210	214	Right-handed 310
Helix 90	AJ9	E	215	232	Right-handed alpha
Helix 91	AK1	E	244	256	Right-handed alpha
Helix 92	AK2	E	268	279	Right-handed alpha
Helix 93	AK3	E	286	296	Right-handed alpha
Helix 94	AK4	E	309	315	Right-handed alpha
Helix 95	AK5	E	324	338	Right-handed alpha
Helix 96	AK6	E	338	345	Right-handed alpha
Helix 97	AK7	E	357	371	Right-handed alpha
Helix 98	AK8	F	11	28	Right-handed alpha
Helix 99	AK9	F	45	53	Right-handed alpha
Helix 100	AL1	F	68	80	Right-handed alpha
Helix 101	AL2	F	80	87	Right-handed alpha
Helix 102	AL3	F	98	111	Right-handed alpha
Helix 103	AL4	F	132	144	Right-handed alpha
Helix 104	AL5	F	151	160	Right-handed alpha
Helix 105	AL6	F	164	166	Right-handed 310
Helix 106	AL7	F	173	184	Right-handed alpha
Helix 107	AL8	F	193	199	Right-handed alpha
Helix 108	AL9	F	210	214	Right-handed 310
Helix 109	AM1	F	215	232	Right-handed alpha
Helix 110	AM2	F	244	256	Right-handed alpha
Helix 111	AM3	F	268	279	Right-handed alpha
Helix 112	AM4	F	286	296	Right-handed alpha
Helix 113	AM5	F	309	315	Right-handed alpha
Helix 114	AM6	F	324	338	Right-handed alpha
Helix 115	AM7	F	338	344	Right-handed alpha
Helix 116	AM8	F	357	371	Right-handed alpha
Helix 117	AM9	G	11	28	Right-handed alpha
Helix 118	AN1	G	45	53	Right-handed alpha
Helix 119	AN2	G	68	80	Right-handed alpha
Helix 120	AN3	G	80	87	Right-handed alpha
Helix 121	AN4	G	98	111	Right-handed alpha
Helix 122	AN5	G	132	144	Right-handed alpha
Helix 123	AN6	G	151	160	Right-handed alpha
Helix 124	AN7	G	164	166	Right-handed 310
Helix 125	AN8	G	173	184	Right-handed alpha
Helix 126	AN9	G	191	199	Right-handed alpha
Helix 127	AO1	G	210	214	Right-handed 310
Helix 128	AO2	G	215	232	Right-handed alpha
Helix 129	AO3	G	244	256	Right-handed alpha
Helix 130	AO4	G	268	279	Right-handed alpha
Helix 131	AO5	G	286	296	Right-handed alpha
Helix 132	AO6	G	309	315	Right-handed alpha
Helix 133	AO7	G	324	338	Right-handed alpha
Helix 134	AO8	G	338	345	Right-handed alpha
Helix 135	AO9	G	357	371	Right-handed alpha
Helix 136	AP1	H	11	28	Right-handed alpha
Helix 137	AP2	H	45	53	Right-handed alpha
Helix 138	AP3	H	68	80	Right-handed alpha
Helix 139	AP4	H	80	87	Right-handed alpha
Helix 140	AP5	H	98	111	Right-handed alpha
Helix 141	AP6	H	132	144	Right-handed alpha
Helix 142	AP7	H	151	160	Right-handed alpha
Helix 143	AP8	H	164	166	Right-handed 310
Helix 144	AP9	H	173	184	Right-handed alpha
Helix 145	AQ1	H	185	190	Right-handed alpha
Helix 146	AQ2	H	191	199	Right-handed alpha
Helix 147	AQ3	H	210	214	Right-handed 310
Helix 148	AQ4	H	215	232	Right-handed alpha
Helix 149	AQ5	H	244	256	Right-handed alpha
Helix 150	AQ6	H	268	279	Right-handed alpha
Helix 151	AQ7	H	286	296	Right-handed alpha
Helix 152	AQ8	H	309	315	Right-handed alpha
Helix 153	AQ9	H	324	338	Right-handed alpha
Helix 154	AR1	H	338	344	Right-handed alpha
Helix 155	AR2	H	357	371	Right-handed alpha

There are 16 sheets in PDB entry 7VZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	31	37	parallel
Strand 3	A	3	9	parallel
Strand 4	A	91	95	parallel
Strand 5	A	115	118	parallel
Strand 6	A	146	149	parallel
Strand 7	A	168	170	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	264	first strand
Strand 2	A	236	240	parallel
Strand 3	A	203	207	parallel
Strand 4	A	281	284	parallel
Strand 5	A	300	302	parallel
Strand 6	A	318	320	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	59	first strand
Strand 2	B	31	37	parallel
Strand 3	B	3	9	parallel
Strand 4	B	91	95	parallel
Strand 5	B	115	118	parallel
Strand 6	B	146	149	parallel
Strand 7	B	168	170	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	264	first strand
Strand 2	B	235	240	parallel
Strand 3	B	202	207	parallel
Strand 4	B	281	284	parallel
Strand 5	B	300	302	parallel
Strand 6	B	318	320	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	59	first strand
Strand 2	C	31	37	parallel
Strand 3	C	3	9	parallel
Strand 4	C	91	95	parallel
Strand 5	C	115	118	parallel
Strand 6	C	146	149	parallel
Strand 7	C	168	170	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	264	first strand
Strand 2	C	236	240	parallel
Strand 3	C	203	207	parallel
Strand 4	C	281	284	parallel
Strand 5	C	300	302	parallel
Strand 6	C	318	320	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	59	first strand
Strand 2	D	31	37	parallel
Strand 3	D	3	9	parallel
Strand 4	D	91	95	parallel
Strand 5	D	115	118	parallel
Strand 6	D	146	149	parallel
Strand 7	D	168	170	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	264	first strand
Strand 2	D	236	240	parallel
Strand 3	D	203	207	parallel
Strand 4	D	281	284	parallel
Strand 5	D	300	302	parallel
Strand 6	D	318	320	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	59	first strand
Strand 2	E	31	37	parallel
Strand 3	E	3	9	parallel
Strand 4	E	91	95	parallel
Strand 5	E	115	118	parallel
Strand 6	E	146	149	parallel
Strand 7	E	168	170	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	261	264	first strand
Strand 2	E	236	240	parallel
Strand 3	E	203	207	parallel
Strand 4	E	281	284	parallel
Strand 5	E	300	302	parallel
Strand 6	E	318	320	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	59	first strand
Strand 2	F	31	37	parallel
Strand 3	F	3	9	parallel
Strand 4	F	91	95	parallel
Strand 5	F	115	118	parallel
Strand 6	F	146	149	parallel
Strand 7	F	168	170	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	261	264	first strand
Strand 2	F	236	240	parallel
Strand 3	F	203	207	parallel
Strand 4	F	281	284	parallel
Strand 5	F	300	302	parallel
Strand 6	F	318	320	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	58	59	first strand
Strand 2	G	31	37	parallel
Strand 3	G	3	9	parallel
Strand 4	G	91	95	parallel
Strand 5	G	115	118	parallel
Strand 6	G	146	149	parallel
Strand 7	G	168	170	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	261	264	first strand
Strand 2	G	236	240	parallel
Strand 3	G	203	207	parallel
Strand 4	G	281	284	parallel
Strand 5	G	300	302	parallel
Strand 6	G	318	320	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	59	first strand
Strand 2	H	31	37	parallel
Strand 3	H	3	9	parallel
Strand 4	H	91	95	parallel
Strand 5	H	115	118	parallel
Strand 6	H	146	149	parallel
Strand 7	H	168	170	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	261	264	first strand
Strand 2	H	236	240	parallel
Strand 3	H	203	207	parallel
Strand 4	H	281	284	parallel
Strand 5	H	300	302	parallel
Strand 6	H	318	320	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7VZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7VZ6