Analysis of interatomic Contacts of Structural Units in PDB entry:
7W01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W01 entry

There is 1 chain in PDB entry 7W01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 1698
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7W01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 20Right-handed alpha
Helix 2
AA2
A
21 30Right-handed alpha
Helix 3
AA3
A
37 45Right-handed alpha
Helix 4
AA4
A
87 99Right-handed alpha
Helix 5
AA5
A
112 122Right-handed alpha
Helix 6
AA6
A
210 225Right-handed alpha
Helix 7
AA7
A
229 237Right-handed alpha
Helix 8
AA8
A
254 272Right-handed alpha
Helix 9
AA9
A
276 288Right-handed alpha
Helix 10
AB1
A
289 296Right-handed alpha
Helix 11
AB2
A
302 328Right-handed alpha
Helix 12
AB3
A
342 365Right-handed alpha
Helix 13
AB4
A
370 378Right-handed alpha
Helix 14
AB5
A
379 385Right-handed alpha
Helix 15
AB6
A
386 390Right-handed 310
Helix 16
AB7
A
400 408Right-handed alpha
Helix 17
AB8
A
410 427Right-handed alpha
Helix 18
AB9
A
449 474Right-handed alpha
Helix 19
AC1
A
574 581Right-handed alpha
Helix 20
AC2
A
600 605Right-handed alpha
Helix 21
AC3
A
622 634Right-handed alpha
Helix 22
AC4
A
641 652Right-handed alpha
Helix 23
AC5
A
669 679Right-handed alpha
Helix 24
AC6
A
698 710Right-handed alpha
Helix 25
AC7
A
724 729Right-handed alpha
Helix 26
AC8
A
746 755Right-handed alpha
Helix 27
AC9
A
769 781Right-handed alpha
Helix 28
AD1
A
799 803Right-handed 310
Helix 29
AD2
A
805 816Right-handed alpha
Helix 30
AD3
A
831 843Right-handed alpha
Helix 31
AD4
A
900 917Right-handed alpha
Helix 32
AD5
A
930 943Right-handed alpha
Helix 33
AD6
A
979 988Right-handed alpha
Helix 34
AD7
A
1005 1015Right-handed alpha
Helix 35
AD8
A
1018 1023Right-handed alpha
Helix 36
AD9
A
1048 1065Right-handed alpha
Helix 37
AE1
A
1082 1090Right-handed alpha
Helix 38
AE2
A
1096 1106Right-handed alpha
Helix 39
AE3
A
1111 1116Right-handed 310
Helix 40
AE4
A
1117 1125Right-handed alpha
Helix 41
AE5
A
1126 1134Right-handed alpha
Helix 42
AE6
A
1137 1152Right-handed alpha
Helix 43
AE7
A
1154 1167Right-handed alpha
Helix 44
AE8
A
1169 1173Right-handed 310
Helix 45
AE9
A
1177 1199Right-handed alpha
Helix 46
AF1
A
1200 1203Right-handed 310
Helix 47
AF2
A
1205 1230Right-handed alpha
Helix 48
AF3
A
1241 1249Right-handed alpha
Helix 49
AF4
A
1254 1274Right-handed alpha
Helix 50
AF5
A
1277 1288Right-handed alpha
Helix 51
AF6
A
1306 1311Right-handed alpha
Helix 52
AF7
A
1315 1326Right-handed alpha
Helix 53
AF8
A
1358 1368Right-handed alpha
Helix 54
AF9
A
1421 1430Right-handed alpha
Helix 55
AG1
A
1472 1483Right-handed alpha
Helix 56
AG2
A
1490 1502Right-handed alpha
Helix 57
AG3
A
1504 1508Right-handed 310
Helix 58
AG4
A
1520 1525Right-handed alpha
Helix 59
AG5
A
1546 1563Right-handed alpha
Helix 60
AG6
A
1575 1580Right-handed alpha
Helix 61
AG7
A
1597 1606Right-handed alpha
Helix 62
AG8
A
1619 1634Right-handed alpha
Helix 63
AG9
A
1660 1673Right-handed alpha
Helix 64
AH1
A
1684 1690Right-handed alpha
Helix 65
AH2
A
1691 1696Right-handed 310
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There are 12 sheets in PDB entry 7W01. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
238 244anti-parallel
Strand 3
A
1035 1042parallel
Strand 4
A
1028 1032anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 109first strand
Strand 2
A
79 82parallel
Strand 3
A
129 133parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 151first strand
Strand 2
A
1071 1073parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 557first strand
Strand 2
A
528 533anti-parallel
Strand 3
A
589 591anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 537first strand
Strand 2
A
549 552anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 611first strand
Strand 2
A
685 688parallel
Strand 3
A
715 718parallel
Strand 4
A
560 564parallel
Strand 5
A
732 736parallel
Strand 6
A
741 745anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
786 788first strand
Strand 2
A
795 796anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1387 1391first strand
Strand 2
A
1395 1400anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1410 1412first strand
Strand 2
A
1566 1568parallel
Strand 3
A
1535 1537parallel
Strand 4
A
1458 1460parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1415 1416first strand
Strand 2
A
1586 1588parallel
Strand 3
A
1591 1592anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1441 1442first strand
Strand 2
A
1445 1446anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1614 1615first strand
Strand 2
A
1675 1677anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il