Analysis of interatomic Contacts of Structural Units in PDB entry:
7W02


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W02 entry

There is 1 chain in PDB entry 7W02 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1LEU 1695
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 7W02. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 20Right-handed alpha
Helix 2
AA2
A
21 30Right-handed alpha
Helix 3
AA3
A
36 46Right-handed alpha
Helix 4
AA4
A
88 101Right-handed alpha
Helix 5
AA5
A
112 122Right-handed alpha
Helix 6
AA6
A
139 143Right-handed 310
Helix 7
AA7
A
210 227Right-handed alpha
Helix 8
AA8
A
229 235Right-handed alpha
Helix 9
AA9
A
263 284Right-handed alpha
Helix 10
AB1
A
289 299Right-handed alpha
Helix 11
AB2
A
301 326Right-handed alpha
Helix 12
AB3
A
342 365Right-handed alpha
Helix 13
AB4
A
370 385Right-handed alpha
Helix 14
AB5
A
386 390Right-handed 310
Helix 15
AB6
A
393 397Right-handed 310
Helix 16
AB7
A
400 406Right-handed alpha
Helix 17
AB8
A
407 409Right-handed 310
Helix 18
AB9
A
410 427Right-handed alpha
Helix 19
AC1
A
449 474Right-handed alpha
Helix 20
AC2
A
575 580Right-handed alpha
Helix 21
AC3
A
600 605Right-handed alpha
Helix 22
AC4
A
622 635Right-handed alpha
Helix 23
AC5
A
640 653Right-handed alpha
Helix 24
AC6
A
668 680Right-handed alpha
Helix 25
AC7
A
696 710Right-handed alpha
Helix 26
AC8
A
724 729Right-handed alpha
Helix 27
AC9
A
750 755Right-handed alpha
Helix 28
AD1
A
769 781Right-handed alpha
Helix 29
AD2
A
803 805Right-handed 310
Helix 30
AD3
A
806 816Right-handed alpha
Helix 31
AD4
A
816 821Right-handed alpha
Helix 32
AD5
A
831 843Right-handed alpha
Helix 33
AD6
A
900 917Right-handed alpha
Helix 34
AD7
A
917 922Right-handed alpha
Helix 35
AD8
A
922 936Right-handed alpha
Helix 36
AD9
A
941 946Right-handed alpha
Helix 37
AE1
A
979 994Right-handed alpha
Helix 38
AE2
A
1003 1016Right-handed alpha
Helix 39
AE3
A
1017 1022Right-handed 310
Helix 40
AE4
A
1048 1066Right-handed alpha
Helix 41
AE5
A
1095 1112Right-handed alpha
Helix 42
AE6
A
1113 1115Right-handed 310
Helix 43
AE7
A
1116 1125Right-handed alpha
Helix 44
AE8
A
1126 1134Right-handed alpha
Helix 45
AE9
A
1137 1167Right-handed alpha
Helix 46
AF1
A
1169 1173Right-handed 310
Helix 47
AF2
A
1176 1199Right-handed alpha
Helix 48
AF3
A
1200 1202Right-handed 310
Helix 49
AF4
A
1206 1220Right-handed alpha
Helix 50
AF5
A
1221 1231Right-handed alpha
Helix 51
AF6
A
1240 1245Right-handed alpha
Helix 52
AF7
A
1248 1251Right-handed 310
Helix 53
AF8
A
1252 1274Right-handed alpha
Helix 54
AF9
A
1277 1287Right-handed alpha
Helix 55
AG1
A
1304 1325Right-handed alpha
Helix 56
AG2
A
1358 1368Right-handed alpha
Helix 57
AG3
A
1421 1431Right-handed alpha
Helix 58
AG4
A
1472 1484Right-handed alpha
Helix 59
AG5
A
1487 1490Right-handed 310
Helix 60
AG6
A
1491 1501Right-handed alpha
Helix 61
AG7
A
1518 1528Right-handed alpha
Helix 62
AG8
A
1546 1562Right-handed alpha
Helix 63
AG9
A
1597 1603Right-handed alpha
Helix 64
AH1
A
1622 1635Right-handed alpha
Helix 65
AH2
A
1660 1664Right-handed alpha
Helix 66
AH3
A
1665 1668Right-handed 310
Helix 67
AH4
A
1684 1691Right-handed alpha
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There are 9 sheets in PDB entry 7W02. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
105 106first strand
Strand 2
A
78 82parallel
Strand 3
A
129 135parallel
Strand 4
A
150 154anti-parallel
Strand 5
A
1072 1075parallel
Strand 6
A
957 958anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
238 241first strand
Strand 2
A
1035 1042parallel
Strand 3
A
1025 1032anti-parallel
Strand 4
A
967 971parallel
Strand 5
A
996 999parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
547 557first strand
Strand 2
A
528 538anti-parallel
Strand 3
A
587 591anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
608 611first strand
Strand 2
A
685 689parallel
Strand 3
A
715 719parallel
Strand 4
A
561 566parallel
Strand 5
A
732 736parallel
Strand 6
A
741 745anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
785 786first strand
Strand 2
A
796 798anti-parallel
Strand 3
A
758 761anti-parallel
Strand 4
A
826 828anti-parallel
Strand 5
A
1677 1681anti-parallel
Strand 6
A
1610 1614anti-parallel
Strand 7
A
1649 1650anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1404 1406first strand
Strand 2
A
1381 1384anti-parallel
Strand 3
A
1439 1442anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1386 1390first strand
Strand 2
A
1396 1401anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1411 1412first strand
Strand 2
A
1566 1568parallel
Strand 3
A
1535 1538parallel
Strand 4
A
1458 1461parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1415 1416first strand
Strand 2
A
1586 1588parallel
Strand 3
A
1591 1594anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il