Analysis of interatomic Contacts of Structural Units in PDB entry:
7W09


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W09 entry

There is 1 chain in PDB entry 7W09 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1TYR 477
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7W09. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 11Right-handed 310
Helix 2
AA2
A
21 38Right-handed alpha
Helix 3
AA3
A
48 58Right-handed alpha
Helix 4
AA4
A
82 107Right-handed alpha
Helix 5
AA5
A
124 132Right-handed alpha
Helix 6
AA6
A
143 155Right-handed alpha
Helix 7
AA7
A
182 184Right-handed 310
Helix 8
AA8
A
187 192Right-handed 310
Helix 9
AA9
A
193 203Right-handed alpha
Helix 10
AB1
A
204 206Right-handed 310
Helix 11
AB2
A
207 211Right-handed 310
Helix 12
AB3
A
219 222Right-handed 310
Helix 13
AB4
A
223 234Right-handed alpha
Helix 14
AB5
A
262 270Right-handed alpha
Helix 15
AB6
A
288 300Right-handed alpha
Helix 16
AB7
A
311 318Right-handed 310
Helix 17
AB8
A
352 358Right-handed alpha
Helix 18
AB9
A
370 379Right-handed alpha
Helix 19
AC1
A
392 403Right-handed alpha
Helix 20
AC2
A
422 435Right-handed alpha
Helix 21
AC3
A
436 458Right-handed alpha
Helix 22
AC4
A
461 477Right-handed alpha
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There are 3 sheets in PDB entry 7W09. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
41 47parallel
Strand 3
A
13 17parallel
Strand 4
A
113 119parallel
Strand 5
A
135 140parallel
Strand 6
A
213 216parallel
Strand 7
A
236 238parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
179 180anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 338first strand
Strand 2
A
344 348anti-parallel
Strand 3
A
305 309parallel
Strand 4
A
276 280parallel
Strand 5
A
362 367parallel
Strand 6
A
384 386parallel
Strand 7
A
407 409parallel
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