Analysis of interatomic Contacts of Structural Units in PDB entry:
7W0I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W0I entry

There are 4 chains in PDB entry 7W0I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 6	ARG 339
B	SER 6	ARG 339
C	SER 6	ARG 339
D	SER 6	ALA 337

There are 68 helices in PDB entry 7W0I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	15	Right-handed 310
Helix 2	AA2	A	18	28	Right-handed alpha
Helix 3	AA3	A	39	53	Right-handed alpha
Helix 4	AA4	A	65	78	Right-handed alpha
Helix 5	AA5	A	90	95	Right-handed alpha
Helix 6	AA6	A	98	105	Right-handed alpha
Helix 7	AA7	A	119	128	Right-handed alpha
Helix 8	AA8	A	154	168	Right-handed alpha
Helix 9	AA9	A	178	187	Right-handed alpha
Helix 10	AB1	A	189	195	Right-handed alpha
Helix 11	AB2	A	205	208	Right-handed 310
Helix 12	AB3	A	219	223	Right-handed 310
Helix 13	AB4	A	225	233	Right-handed alpha
Helix 14	AB5	A	239	252	Right-handed alpha
Helix 15	AB6	A	254	278	Right-handed alpha
Helix 16	AB7	A	295	303	Right-handed alpha
Helix 17	AB8	A	327	339	Right-handed alpha
Helix 18	AB9	B	11	15	Right-handed 310
Helix 19	AC1	B	18	28	Right-handed alpha
Helix 20	AC2	B	39	53	Right-handed alpha
Helix 21	AC3	B	65	78	Right-handed alpha
Helix 22	AC4	B	90	95	Right-handed alpha
Helix 23	AC5	B	98	105	Right-handed alpha
Helix 24	AC6	B	119	128	Right-handed alpha
Helix 25	AC7	B	154	168	Right-handed alpha
Helix 26	AC8	B	178	187	Right-handed alpha
Helix 27	AC9	B	189	195	Right-handed alpha
Helix 28	AD1	B	205	208	Right-handed 310
Helix 29	AD2	B	219	223	Right-handed 310
Helix 30	AD3	B	225	233	Right-handed alpha
Helix 31	AD4	B	240	252	Right-handed alpha
Helix 32	AD5	B	254	277	Right-handed alpha
Helix 33	AD6	B	295	303	Right-handed alpha
Helix 34	AD7	B	327	339	Right-handed alpha
Helix 35	AD8	C	11	15	Right-handed 310
Helix 36	AD9	C	18	28	Right-handed alpha
Helix 37	AE1	C	39	53	Right-handed alpha
Helix 38	AE2	C	65	78	Right-handed alpha
Helix 39	AE3	C	90	95	Right-handed alpha
Helix 40	AE4	C	98	105	Right-handed alpha
Helix 41	AE5	C	119	128	Right-handed alpha
Helix 42	AE6	C	154	168	Right-handed alpha
Helix 43	AE7	C	178	187	Right-handed alpha
Helix 44	AE8	C	189	195	Right-handed alpha
Helix 45	AE9	C	205	208	Right-handed 310
Helix 46	AF1	C	219	223	Right-handed 310
Helix 47	AF2	C	225	233	Right-handed alpha
Helix 48	AF3	C	240	252	Right-handed alpha
Helix 49	AF4	C	254	277	Right-handed alpha
Helix 50	AF5	C	295	306	Right-handed alpha
Helix 51	AF6	C	327	339	Right-handed alpha
Helix 52	AF7	D	11	15	Right-handed 310
Helix 53	AF8	D	18	29	Right-handed alpha
Helix 54	AF9	D	39	53	Right-handed alpha
Helix 55	AG1	D	65	78	Right-handed alpha
Helix 56	AG2	D	90	95	Right-handed alpha
Helix 57	AG3	D	98	105	Right-handed alpha
Helix 58	AG4	D	119	128	Right-handed alpha
Helix 59	AG5	D	154	168	Right-handed alpha
Helix 60	AG6	D	178	187	Right-handed alpha
Helix 61	AG7	D	189	195	Right-handed alpha
Helix 62	AG8	D	205	208	Right-handed 310
Helix 63	AG9	D	219	223	Right-handed 310
Helix 64	AH1	D	225	233	Right-handed alpha
Helix 65	AH2	D	240	252	Right-handed alpha
Helix 66	AH3	D	254	277	Right-handed alpha
Helix 67	AH4	D	295	304	Right-handed alpha
Helix 68	AH5	D	327	339	Right-handed alpha

There are 8 sheets in PDB entry 7W0I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	63	first strand
Strand 2	A	213	217	anti-parallel
Strand 3	A	199	203	anti-parallel
Strand 4	A	171	176	parallel
Strand 5	A	137	144	parallel
Strand 6	A	82	87	parallel
Strand 7	A	107	111	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	293	first strand
Strand 2	A	317	321	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	63	first strand
Strand 2	B	213	217	anti-parallel
Strand 3	B	199	203	anti-parallel
Strand 4	B	171	176	parallel
Strand 5	B	137	144	parallel
Strand 6	B	82	87	parallel
Strand 7	B	107	111	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	293	first strand
Strand 2	B	317	321	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	63	first strand
Strand 2	C	213	217	anti-parallel
Strand 3	C	199	203	anti-parallel
Strand 4	C	171	176	parallel
Strand 5	C	137	144	parallel
Strand 6	C	82	87	parallel
Strand 7	C	107	111	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	293	first strand
Strand 2	C	317	321	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	63	first strand
Strand 2	D	213	217	anti-parallel
Strand 3	D	199	203	anti-parallel
Strand 4	D	171	176	parallel
Strand 5	D	137	144	parallel
Strand 6	D	82	87	parallel
Strand 7	D	107	111	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	289	293	first strand
Strand 2	D	317	321	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W0I

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W0I