Analysis of interatomic Contacts of Structural Units in PDB entry:
7W0J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W0J entry

There are 8 chains in PDB entry 7W0J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 6	LYS 384
D	ASP 3	LYS 384
G	LEU 6	LYS 384
F	LEU 6	LYS 384
B	ASP 5	LYS 384
C	ASP 5	LYS 384
E	ASP 3	LYS 384
H	ASP 5	LYS 384

There are118 helices in PDB entry 7W0J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	27	Right-handed alpha
Helix 2	AA2	A	28	38	Right-handed alpha
Helix 3	AA3	A	42	52	Right-handed alpha
Helix 4	AA4	A	60	64	Right-handed 310
Helix 5	AA5	A	69	82	Right-handed alpha
Helix 6	AA6	A	84	104	Right-handed alpha
Helix 7	AA7	A	106	119	Right-handed alpha
Helix 8	AA8	A	136	140	Right-handed 310
Helix 9	AA9	A	224	226	Right-handed 310
Helix 10	AB1	A	234	272	Right-handed alpha
Helix 11	AB2	A	283	312	Right-handed alpha
Helix 12	AB3	A	316	343	Right-handed alpha
Helix 13	AB4	A	343	348	Right-handed alpha
Helix 14	AB5	A	353	365	Right-handed alpha
Helix 15	AB6	A	370	383	Right-handed alpha
Helix 16	AB7	D	10	28	Right-handed alpha
Helix 17	AB8	D	28	39	Right-handed alpha
Helix 18	AB9	D	42	52	Right-handed alpha
Helix 19	AC1	D	69	82	Right-handed alpha
Helix 20	AC2	D	84	104	Right-handed alpha
Helix 21	AC3	D	106	119	Right-handed alpha
Helix 22	AC4	D	136	140	Right-handed 310
Helix 23	AC5	D	224	226	Right-handed 310
Helix 24	AC6	D	235	272	Right-handed alpha
Helix 25	AC7	D	282	312	Right-handed alpha
Helix 26	AC8	D	316	343	Right-handed alpha
Helix 27	AC9	D	343	349	Right-handed alpha
Helix 28	AD1	D	353	365	Right-handed alpha
Helix 29	AD2	D	370	383	Right-handed alpha
Helix 30	AD3	G	10	28	Right-handed alpha
Helix 31	AD4	G	28	38	Right-handed alpha
Helix 32	AD5	G	42	52	Right-handed alpha
Helix 33	AD6	G	69	82	Right-handed alpha
Helix 34	AD7	G	84	104	Right-handed alpha
Helix 35	AD8	G	106	119	Right-handed alpha
Helix 36	AD9	G	136	140	Right-handed 310
Helix 37	AE1	G	224	226	Right-handed 310
Helix 38	AE2	G	234	272	Right-handed alpha
Helix 39	AE3	G	282	312	Right-handed alpha
Helix 40	AE4	G	316	343	Right-handed alpha
Helix 41	AE5	G	343	348	Right-handed alpha
Helix 42	AE6	G	353	367	Right-handed alpha
Helix 43	AE7	G	370	383	Right-handed alpha
Helix 44	AE8	F	10	28	Right-handed alpha
Helix 45	AE9	F	28	39	Right-handed alpha
Helix 46	AF1	F	42	52	Right-handed alpha
Helix 47	AF2	F	60	64	Right-handed 310
Helix 48	AF3	F	69	82	Right-handed alpha
Helix 49	AF4	F	84	104	Right-handed alpha
Helix 50	AF5	F	106	119	Right-handed alpha
Helix 51	AF6	F	136	140	Right-handed 310
Helix 52	AF7	F	224	226	Right-handed 310
Helix 53	AF8	F	234	272	Right-handed alpha
Helix 54	AF9	F	282	312	Right-handed alpha
Helix 55	AG1	F	316	343	Right-handed alpha
Helix 56	AG2	F	343	348	Right-handed alpha
Helix 57	AG3	F	352	367	Right-handed alpha
Helix 58	AG4	F	370	383	Right-handed alpha
Helix 59	AG5	B	10	27	Right-handed alpha
Helix 60	AG6	B	28	39	Right-handed alpha
Helix 61	AG7	B	42	52	Right-handed alpha
Helix 62	AG8	B	60	64	Right-handed 310
Helix 63	AG9	B	69	82	Right-handed alpha
Helix 64	AH1	B	84	104	Right-handed alpha
Helix 65	AH2	B	106	119	Right-handed alpha
Helix 66	AH3	B	136	140	Right-handed 310
Helix 67	AH4	B	224	226	Right-handed 310
Helix 68	AH5	B	234	272	Right-handed alpha
Helix 69	AH6	B	282	313	Right-handed alpha
Helix 70	AH7	B	316	343	Right-handed alpha
Helix 71	AH8	B	343	348	Right-handed alpha
Helix 72	AH9	B	353	365	Right-handed alpha
Helix 73	AI1	B	370	383	Right-handed alpha
Helix 74	AI2	C	10	28	Right-handed alpha
Helix 75	AI3	C	28	38	Right-handed alpha
Helix 76	AI4	C	42	52	Right-handed alpha
Helix 77	AI5	C	60	64	Right-handed 310
Helix 78	AI6	C	69	82	Right-handed alpha
Helix 79	AI7	C	84	104	Right-handed alpha
Helix 80	AI8	C	106	119	Right-handed alpha
Helix 81	AI9	C	136	140	Right-handed 310
Helix 82	AJ1	C	224	226	Right-handed 310
Helix 83	AJ2	C	234	272	Right-handed alpha
Helix 84	AJ3	C	282	313	Right-handed alpha
Helix 85	AJ4	C	316	343	Right-handed alpha
Helix 86	AJ5	C	343	348	Right-handed alpha
Helix 87	AJ6	C	353	365	Right-handed alpha
Helix 88	AJ7	C	370	383	Right-handed alpha
Helix 89	AJ8	E	10	27	Right-handed alpha
Helix 90	AJ9	E	28	39	Right-handed alpha
Helix 91	AK1	E	42	52	Right-handed alpha
Helix 92	AK2	E	69	82	Right-handed alpha
Helix 93	AK3	E	84	104	Right-handed alpha
Helix 94	AK4	E	106	119	Right-handed alpha
Helix 95	AK5	E	136	140	Right-handed 310
Helix 96	AK6	E	180	183	Right-handed 310
Helix 97	AK7	E	224	226	Right-handed 310
Helix 98	AK8	E	234	272	Right-handed alpha
Helix 99	AK9	E	282	312	Right-handed alpha
Helix 100	AL1	E	316	349	Right-handed alpha
Helix 101	AL2	E	352	365	Right-handed alpha
Helix 102	AL3	E	370	383	Right-handed alpha
Helix 103	AL4	H	10	28	Right-handed alpha
Helix 104	AL5	H	31	38	Right-handed alpha
Helix 105	AL6	H	42	52	Right-handed alpha
Helix 106	AL7	H	60	64	Right-handed 310
Helix 107	AL8	H	69	82	Right-handed alpha
Helix 108	AL9	H	84	104	Right-handed alpha
Helix 109	AM1	H	106	120	Right-handed alpha
Helix 110	AM2	H	136	140	Right-handed 310
Helix 111	AM3	H	180	183	Right-handed 310
Helix 112	AM4	H	224	226	Right-handed 310
Helix 113	AM5	H	234	272	Right-handed alpha
Helix 114	AM6	H	282	312	Right-handed alpha
Helix 115	AM7	H	316	343	Right-handed alpha
Helix 116	AM8	H	343	348	Right-handed alpha
Helix 117	AM9	H	353	365	Right-handed alpha
Helix 118	AN1	H	370	383	Right-handed alpha

There are 23 sheets in PDB entry 7W0J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	124	127	first strand
Strand 2	A	168	174	parallel
Strand 3	A	185	191	anti-parallel
Strand 4	A	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	147	first strand
Strand 2	A	150	161	anti-parallel
Strand 3	A	213	223	anti-parallel
Strand 4	A	197	199	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	124	127	first strand
Strand 2	D	168	174	parallel
Strand 3	D	185	191	anti-parallel
Strand 4	D	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	147	first strand
Strand 2	D	150	161	anti-parallel
Strand 3	D	213	223	anti-parallel
Strand 4	D	197	199	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	273	274	first strand
Strand 2	D	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	124	125	first strand
Strand 2	G	168	174	parallel
Strand 3	G	185	191	anti-parallel
Strand 4	G	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	143	147	first strand
Strand 2	G	150	161	anti-parallel
Strand 3	G	213	223	anti-parallel
Strand 4	G	197	199	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	273	274	first strand
Strand 2	G	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	124	127	first strand
Strand 2	F	168	174	parallel
Strand 3	F	185	191	anti-parallel
Strand 4	F	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	143	147	first strand
Strand 2	F	150	161	anti-parallel
Strand 3	F	213	223	anti-parallel
Strand 4	F	197	202	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	273	274	first strand
Strand 2	F	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	125	first strand
Strand 2	B	168	174	parallel
Strand 3	B	185	191	anti-parallel
Strand 4	B	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	147	first strand
Strand 2	B	150	161	anti-parallel
Strand 3	B	213	223	anti-parallel
Strand 4	B	197	202	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	274	first strand
Strand 2	B	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	127	first strand
Strand 2	C	168	174	parallel
Strand 3	C	185	191	anti-parallel
Strand 4	C	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	147	first strand
Strand 2	C	150	161	anti-parallel
Strand 3	C	213	223	anti-parallel
Strand 4	C	197	199	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	274	first strand
Strand 2	C	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	124	127	first strand
Strand 2	E	168	174	parallel
Strand 3	E	185	191	anti-parallel
Strand 4	E	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	143	147	first strand
Strand 2	E	150	161	anti-parallel
Strand 3	E	213	223	anti-parallel
Strand 4	E	197	199	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	273	274	first strand
Strand 2	E	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	124	127	first strand
Strand 2	H	168	174	parallel
Strand 3	H	185	191	anti-parallel
Strand 4	H	228	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	143	147	first strand
Strand 2	H	150	161	anti-parallel
Strand 3	H	213	223	anti-parallel
Strand 4	H	197	202	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	273	274	first strand
Strand 2	H	277	278	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W0J

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W0J