Analysis of interatomic Contacts of Structural Units in PDB entry:
7W0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W0L entry

There are 6 chains in PDB entry 7W0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 3	PHE 354
B	SER 2	ASN 340
C	SER 34	GLU 94
Q	SER 26	SER 322
R	TRP 24	THR 321
S	ASP 1	LYS 248

There are 40 helices in PDB entry 7W0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	32	Right-handed alpha
Helix 2	AA2	A	46	55	Right-handed alpha
Helix 3	AA3	A	207	212	Right-handed alpha
Helix 4	AA4	A	213	215	Right-handed 310
Helix 5	AA5	A	241	255	Right-handed alpha
Helix 6	AA6	A	270	278	Right-handed alpha
Helix 7	AA7	A	295	309	Right-handed alpha
Helix 8	AA8	A	330	351	Right-handed alpha
Helix 9	AA9	B	3	26	Right-handed alpha
Helix 10	AB1	B	29	34	Right-handed alpha
Helix 11	AB2	B	280	282	Right-handed 310
Helix 12	AB3	C	35	55	Right-handed alpha
Helix 13	AB4	C	60	75	Right-handed alpha
Helix 14	AB5	Q	27	56	Right-handed alpha
Helix 15	AB6	Q	57	61	Right-handed 310
Helix 16	AB7	Q	62	81	Right-handed alpha
Helix 17	AB8	Q	82	91	Right-handed alpha
Helix 18	AB9	Q	98	137	Right-handed alpha
Helix 19	AC1	Q	145	161	Right-handed alpha
Helix 20	AC2	Q	162	167	Right-handed alpha
Helix 21	AC3	Q	190	192	Right-handed 310
Helix 22	AC4	Q	193	232	Right-handed alpha
Helix 23	AC5	Q	238	278	Right-handed alpha
Helix 24	AC6	Q	280	299	Right-handed alpha
Helix 25	AC7	Q	299	311	Right-handed alpha
Helix 26	AC8	Q	312	322	Right-handed alpha
Helix 27	AC9	R	30	61	Right-handed alpha
Helix 28	AD1	R	64	81	Right-handed alpha
Helix 29	AD2	R	81	91	Right-handed alpha
Helix 30	AD3	R	99	132	Right-handed alpha
Helix 31	AD4	R	137	139	Right-handed 310
Helix 32	AD5	R	140	145	Right-handed alpha
Helix 33	AD6	R	146	167	Right-handed alpha
Helix 34	AD7	R	184	188	Right-handed 310
Helix 35	AD8	R	193	232	Right-handed alpha
Helix 36	AD9	R	238	275	Right-handed alpha
Helix 37	AE1	R	281	298	Right-handed alpha
Helix 38	AE2	R	299	311	Right-handed alpha
Helix 39	AE3	R	313	321	Right-handed alpha
Helix 40	AE4	S	220	224	Right-handed 310

There are 14 sheets in PDB entry 7W0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	190	first strand
Strand 2	A	195	200	anti-parallel
Strand 3	A	34	39	parallel
Strand 4	A	220	225	parallel
Strand 5	A	263	268	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	51	first strand
Strand 2	B	336	339	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	151	first strand
Strand 2	B	156	160	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	176	181	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	199	203	anti-parallel
Strand 3	B	208	210	anti-parallel
Strand 4	B	220	222	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	234	first strand
Strand 2	B	240	243	anti-parallel
Strand 3	B	251	254	anti-parallel
Strand 4	B	260	263	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	293	298	anti-parallel
Strand 4	B	304	308	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	171	172	first strand
Strand 2	R	179	180	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	4	7	first strand
Strand 2	S	18	24	anti-parallel
Strand 3	S	78	83	anti-parallel
Strand 4	S	68	73	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	45	51	first strand
Strand 2	S	33	39	anti-parallel
Strand 3	S	96	99	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	146	147	first strand
Strand 2	S	243	245	parallel
Strand 3	S	225	227	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	155	160	first strand
Strand 2	S	211	216	anti-parallel
Strand 3	S	207	208	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	186	189	first strand
Strand 2	S	174	178	anti-parallel
Strand 3	S	229	231	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W0L