Analysis of interatomic Contacts of Structural Units in PDB entry:
7W0N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W0N entry

There are 8 chains in PDB entry 7W0N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 3	PHE 354
B	SER 2	ASN 340
C	SER 34	GLU 94
Q	SER 26	SER 322
R	TRP 24	THR 321
S	ASP 1	LYS 248
D	LEU 18	PRO 32
E	LEU 18	PRO 32

There are 44 helices in PDB entry 7W0N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	30	Right-handed alpha
Helix 2	AA2	A	45	55	Right-handed alpha
Helix 3	AA3	A	211	215	Right-handed 310
Helix 4	AA4	A	241	255	Right-handed alpha
Helix 5	AA5	A	270	272	Right-handed 310
Helix 6	AA6	A	273	281	Right-handed alpha
Helix 7	AA7	A	295	309	Right-handed alpha
Helix 8	AA8	A	329	351	Right-handed alpha
Helix 9	AA9	B	3	26	Right-handed alpha
Helix 10	AB1	B	29	34	Right-handed alpha
Helix 11	AB2	B	35	37	Right-handed 310
Helix 12	AB3	B	280	282	Right-handed 310
Helix 13	AB4	C	35	55	Right-handed alpha
Helix 14	AB5	C	60	76	Right-handed alpha
Helix 15	AB6	Q	27	55	Right-handed alpha
Helix 16	AB7	Q	62	81	Right-handed alpha
Helix 17	AB8	Q	82	91	Right-handed alpha
Helix 18	AB9	Q	97	137	Right-handed alpha
Helix 19	AC1	Q	142	144	Right-handed 310
Helix 20	AC2	Q	145	160	Right-handed alpha
Helix 21	AC3	Q	161	167	Right-handed alpha
Helix 22	AC4	Q	190	232	Right-handed alpha
Helix 23	AC5	Q	238	278	Right-handed alpha
Helix 24	AC6	Q	280	298	Right-handed alpha
Helix 25	AC7	Q	299	311	Right-handed alpha
Helix 26	AC8	Q	312	322	Right-handed alpha
Helix 27	AC9	R	25	56	Right-handed alpha
Helix 28	AD1	R	56	61	Right-handed alpha
Helix 29	AD2	R	65	81	Right-handed alpha
Helix 30	AD3	R	82	91	Right-handed alpha
Helix 31	AD4	R	99	133	Right-handed alpha
Helix 32	AD5	R	137	139	Right-handed 310
Helix 33	AD6	R	140	145	Right-handed alpha
Helix 34	AD7	R	146	167	Right-handed alpha
Helix 35	AD8	R	193	232	Right-handed alpha
Helix 36	AD9	R	238	262	Right-handed alpha
Helix 37	AE1	R	262	275	Right-handed alpha
Helix 38	AE2	R	281	298	Right-handed alpha
Helix 39	AE3	R	299	311	Right-handed alpha
Helix 40	AE4	R	313	321	Right-handed alpha
Helix 41	AE5	S	74	76	Right-handed 310
Helix 42	AE6	S	220	224	Right-handed 310
Helix 43	AE7	D	23	27	Right-handed 310
Helix 44	AE8	E	22	26	Right-handed 310

There are 14 sheets in PDB entry 7W0N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	190	first strand
Strand 2	A	195	200	anti-parallel
Strand 3	A	36	39	parallel
Strand 4	A	220	224	parallel
Strand 5	A	263	268	parallel
Strand 6	A	322	323	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	52	first strand
Strand 2	B	335	338	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	89	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	105	first strand
Strand 2	B	111	115	anti-parallel
Strand 3	B	120	125	anti-parallel
Strand 4	B	134	140	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	151	first strand
Strand 2	B	157	160	anti-parallel
Strand 3	B	166	168	anti-parallel
Strand 4	B	178	180	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	199	203	anti-parallel
Strand 3	B	207	210	anti-parallel
Strand 4	B	220	223	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	234	first strand
Strand 2	B	240	243	anti-parallel
Strand 3	B	251	254	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	305	308	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	171	172	first strand
Strand 2	R	179	180	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	5	7	first strand
Strand 2	S	19	23	anti-parallel
Strand 3	S	78	82	anti-parallel
Strand 4	S	69	73	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	10	11	first strand
Strand 2	S	117	118	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	45	50	first strand
Strand 2	S	33	39	anti-parallel
Strand 3	S	97	99	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	146	147	first strand
Strand 2	S	243	245	parallel
Strand 3	S	226	229	anti-parallel
Strand 4	S	176	179	anti-parallel
Strand 5	S	186	189	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	157	160	first strand
Strand 2	S	211	214	anti-parallel
Strand 3	S	207	208	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W0N

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W0N