Analysis of interatomic Contacts of Structural Units in PDB entry:
7W16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W16 entry

There is 1 chain in PDB entry 7W16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 39ARG 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 7W16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 45Right-handed 310
Helix 2
AA2
A
46 55Right-handed alpha
Helix 3
AA3
A
134 140Right-handed alpha
Helix 4
AA4
A
215 220Right-handed alpha
Helix 5
AA5
A
262 265Right-handed 310
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There are 2 sheets in PDB entry 7W16. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
87 90anti-parallel
Strand 3
A
95 101anti-parallel
Strand 4
A
283 296anti-parallel
Strand 5
A
123 132anti-parallel
Strand 6
A
236 243anti-parallel
Strand 7
A
246 251anti-parallel
Strand 8
A
254 260anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 73first strand
Strand 2
A
56 60anti-parallel
Strand 3
A
106 111anti-parallel
Strand 4
A
267 279anti-parallel
Strand 5
A
148 160anti-parallel
Strand 6
A
180 188anti-parallel
Strand 7
A
191 200anti-parallel
Strand 8
A
222 229anti-parallel
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