Analysis of interatomic Contacts of Structural Units in PDB entry:
7W41


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W41 entry

There is 1 chain in PDB entry 7W41 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 38LEU 521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7W41. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 41Right-handed 310
Helix 2
AA2
A
42 68Right-handed alpha
Helix 3
AA3
A
73 103Right-handed alpha
Helix 4
AA4
A
108 143Right-handed alpha
Helix 5
AA5
A
149 151Right-handed 310
Helix 6
AA6
A
152 179Right-handed alpha
Helix 7
AA7
A
204 219Right-handed alpha
Helix 8
AA8
A
219 240Right-handed alpha
Helix 9
AA9
A
249 253Right-handed 310
Helix 10
AB1
A
256 268Right-handed alpha
Helix 11
AB2
A
288 301Right-handed alpha
Helix 12
AB3
A
304 306Right-handed 310
Helix 13
AB4
A
317 331Right-handed alpha
Helix 14
AB5
A
342 353Right-handed alpha
Helix 15
AB6
A
366 374Right-handed alpha
Helix 16
AB7
A
385 391Right-handed alpha
Helix 17
AB8
A
403 420Right-handed alpha
Helix 18
AB9
A
422 475Right-handed alpha
Helix 19
AC1
A
481 510Right-handed alpha
Helix 20
AC2
A
510 521Right-handed alpha
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There are 2 sheets in PDB entry 7W41. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 186first strand
Strand 2
A
191 197anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 337first strand
Strand 2
A
308 313parallel
Strand 3
A
274 279parallel
Strand 4
A
355 358parallel
Strand 5
A
378 382parallel
Strand 6
A
397 399parallel
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