Analysis of interatomic Contacts of Structural Units in PDB entry:
7W43

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W43 entry

There are 12 chains in PDB entry 7W43 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 4	LYS 158
B	ILE 4	LYS 158
C	ILE 4	SER 157
D	ASN 3	SER 157
E	ILE 4	SER 157
F	ASN 3	LYS 158
G	ILE 4	SER 157
H	ILE 4	SER 157
I	ILE 4	SER 157
J	PHE 6	LYS 158
K	PRO 5	LYS 158
L	ASN 3	SER 157

There are 46 helices in PDB entry 7W43. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	18	Right-handed 310
Helix 2	AA2	A	21	41	Right-handed alpha
Helix 3	AA3	A	54	66	Right-handed alpha
Helix 4	AA4	A	138	158	Right-handed alpha
Helix 5	AA5	B	21	41	Right-handed alpha
Helix 6	AA6	B	54	66	Right-handed alpha
Helix 7	AA7	B	138	158	Right-handed alpha
Helix 8	AA8	C	13	18	Right-handed 310
Helix 9	AA9	C	21	41	Right-handed alpha
Helix 10	AB1	C	54	66	Right-handed alpha
Helix 11	AB2	C	138	157	Right-handed alpha
Helix 12	AB3	D	14	18	Right-handed 310
Helix 13	AB4	D	21	41	Right-handed alpha
Helix 14	AB5	D	54	66	Right-handed alpha
Helix 15	AB6	D	138	157	Right-handed alpha
Helix 16	AB7	E	14	18	Right-handed 310
Helix 17	AB8	E	21	41	Right-handed alpha
Helix 18	AB9	E	54	67	Right-handed alpha
Helix 19	AC1	E	138	157	Right-handed alpha
Helix 20	AC2	F	13	18	Right-handed 310
Helix 21	AC3	F	21	41	Right-handed alpha
Helix 22	AC4	F	54	66	Right-handed alpha
Helix 23	AC5	F	138	158	Right-handed alpha
Helix 24	AC6	G	13	17	Right-handed 310
Helix 25	AC7	G	21	41	Right-handed alpha
Helix 26	AC8	G	54	66	Right-handed alpha
Helix 27	AC9	G	138	157	Right-handed alpha
Helix 28	AD1	H	13	18	Right-handed 310
Helix 29	AD2	H	21	41	Right-handed alpha
Helix 30	AD3	H	54	66	Right-handed alpha
Helix 31	AD4	H	138	148	Right-handed alpha
Helix 32	AD5	H	148	156	Right-handed alpha
Helix 33	AD6	I	14	18	Right-handed 310
Helix 34	AD7	I	21	41	Right-handed alpha
Helix 35	AD8	I	54	66	Right-handed alpha
Helix 36	AD9	I	138	157	Right-handed alpha
Helix 37	AE1	J	21	41	Right-handed alpha
Helix 38	AE2	J	54	66	Right-handed alpha
Helix 39	AE3	J	138	158	Right-handed alpha
Helix 40	AE4	K	13	18	Right-handed 310
Helix 41	AE5	K	21	41	Right-handed alpha
Helix 42	AE6	K	54	66	Right-handed alpha
Helix 43	AE7	K	138	158	Right-handed alpha
Helix 44	AE8	L	21	41	Right-handed alpha
Helix 45	AE9	L	54	66	Right-handed alpha
Helix 46	AF1	L	138	157	Right-handed alpha

There are 25 sheets in PDB entry 7W43. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	48	first strand
Strand 2	A	128	136	anti-parallel
Strand 3	A	115	123	anti-parallel
Strand 4	A	106	110	anti-parallel
Strand 5	A	72	76	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	86	first strand
Strand 2	A	99	101	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	48	first strand
Strand 2	B	128	136	anti-parallel
Strand 3	B	115	123	anti-parallel
Strand 4	B	106	110	anti-parallel
Strand 5	B	72	76	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	86	first strand
Strand 2	B	99	101	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	48	first strand
Strand 2	C	127	136	anti-parallel
Strand 3	C	115	124	anti-parallel
Strand 4	C	106	110	anti-parallel
Strand 5	C	72	76	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	86	first strand
Strand 2	C	99	101	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	48	first strand
Strand 2	D	128	136	anti-parallel
Strand 3	D	115	123	anti-parallel
Strand 4	D	106	110	anti-parallel
Strand 5	D	73	76	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	86	first strand
Strand 2	D	99	101	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	48	first strand
Strand 2	E	127	136	anti-parallel
Strand 3	E	115	124	anti-parallel
Strand 4	E	106	110	anti-parallel
Strand 5	E	72	76	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	86	first strand
Strand 2	E	99	101	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	48	first strand
Strand 2	F	128	136	anti-parallel
Strand 3	F	115	123	anti-parallel
Strand 4	F	106	110	anti-parallel
Strand 5	F	72	76	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	84	86	first strand
Strand 2	F	99	101	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	48	first strand
Strand 2	G	133	136	anti-parallel
Strand 3	G	115	118	anti-parallel
Strand 4	G	106	110	anti-parallel
Strand 5	G	72	76	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	84	86	first strand
Strand 2	G	99	101	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	121	123	first strand
Strand 2	G	128	130	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	48	first strand
Strand 2	H	128	136	anti-parallel
Strand 3	H	115	123	anti-parallel
Strand 4	H	106	110	anti-parallel
Strand 5	H	72	76	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	84	86	first strand
Strand 2	H	99	101	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	45	48	first strand
Strand 2	I	127	136	anti-parallel
Strand 3	I	115	124	anti-parallel
Strand 4	I	106	110	anti-parallel
Strand 5	I	72	76	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	84	86	first strand
Strand 2	I	99	101	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	45	48	first strand
Strand 2	J	128	136	anti-parallel
Strand 3	J	115	123	anti-parallel
Strand 4	J	106	110	anti-parallel
Strand 5	J	72	76	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	84	86	first strand
Strand 2	J	99	101	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	48	first strand
Strand 2	K	128	136	anti-parallel
Strand 3	K	115	123	anti-parallel
Strand 4	K	106	110	anti-parallel
Strand 5	K	72	76	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	84	86	first strand
Strand 2	K	99	101	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	48	first strand
Strand 2	L	128	136	anti-parallel
Strand 3	L	115	123	anti-parallel
Strand 4	L	106	110	anti-parallel
Strand 5	L	72	76	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	84	86	first strand
Strand 2	L	99	101	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W43

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W43