Analysis of interatomic Contacts of Structural Units in PDB entry:
7W51


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W51 entry

There are 3 chains in PDB entry 7W51 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5GLU 72
A
 GLY 74PHE 375
B
 TYR 7GLU 160
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 7W51. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 61Right-handed alpha
Helix 2
AA2
A
78 92Right-handed alpha
Helix 3
AA3
A
97 101Right-handed 310
Helix 4
AA4
A
113 126Right-handed alpha
Helix 5
AA5
A
137 145Right-handed alpha
Helix 6
AA6
A
172 175Right-handed 310
Helix 7
AA7
A
181 194Right-handed alpha
Helix 8
AA8
A
195 197Right-handed 310
Helix 9
AA9
A
202 217Right-handed alpha
Helix 10
AB1
A
222 233Right-handed alpha
Helix 11
AB2
A
252 263Right-handed alpha
Helix 12
AB3
A
264 268Right-handed 310
Helix 13
AB4
A
273 284Right-handed alpha
Helix 14
AB5
A
285 288Right-handed 310
Helix 15
AB6
A
289 295Right-handed alpha
Helix 16
AB7
A
301 306Right-handed 310
Helix 17
AB8
A
308 321Right-handed alpha
Helix 18
AB9
A
334 336Right-handed 310
Helix 19
AC1
A
337 347Right-handed alpha
Helix 20
AC2
A
349 355Right-handed alpha
Helix 21
AC3
A
359 366Right-handed alpha
Helix 22
AC4
A
368 374Right-handed alpha
Helix 23
AC5
B
8 12Right-handed 310
Helix 24
AC6
B
19 31Right-handed alpha
Helix 25
AC7
B
32 37Right-handed 310
Helix 26
AC8
B
59 63Right-handed 310
Helix 27
AC9
B
100 118Right-handed alpha
Helix 28
AD1
B
133 138Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 7W51. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
16 21anti-parallel
Strand 3
A
8 12anti-parallel
Strand 4
A
103 107parallel
Strand 5
A
131 136parallel
Strand 6
A
357 358anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
35 38anti-parallel
Strand 3
A
65 68anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
75 76anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
160 166anti-parallel
Strand 3
A
176 178anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
160 166anti-parallel
Strand 3
A
150 154anti-parallel
Strand 4
A
297 300parallel
Strand 5
A
329 330parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
247 250anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 57first strand
Strand 2
B
44 51anti-parallel
Strand 3
B
71 78anti-parallel
Strand 4
B
88 95anti-parallel
Strand 5
B
123 128parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 67first strand
Strand 2
B
146 148parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il