Analysis of interatomic Contacts of Structural Units in PDB entry:
7W5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W5H entry

There are 2 chains in PDB entry 7W5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 31ARG 385
B
 SER 33ARG 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7W5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 44Right-handed alpha
Helix 2
AA2
A
52 57Right-handed 310
Helix 3
AA3
A
67 81Right-handed alpha
Helix 4
AA4
A
85 96Right-handed alpha
Helix 5
AA5
A
97 106Right-handed alpha
Helix 6
AA6
A
110 131Right-handed alpha
Helix 7
AA7
A
141 160Right-handed alpha
Helix 8
AA8
A
172 177Right-handed alpha
Helix 9
AA9
A
177 188Right-handed alpha
Helix 10
AB1
A
190 211Right-handed alpha
Helix 11
AB2
A
222 234Right-handed alpha
Helix 12
AB3
A
236 247Right-handed alpha
Helix 13
AB4
A
252 257Right-handed alpha
Helix 14
AB5
A
258 280Right-handed alpha
Helix 15
AB6
A
280 287Right-handed alpha
Helix 16
AB7
A
292 302Right-handed alpha
Helix 17
AB8
A
304 327Right-handed alpha
Helix 18
AB9
A
328 330Right-handed 310
Helix 19
AC1
A
336 362Right-handed alpha
Helix 20
AC2
A
369 373Right-handed 310
Helix 21
AC3
B
34 44Right-handed alpha
Helix 22
AC4
B
52 57Right-handed 310
Helix 23
AC5
B
67 80Right-handed alpha
Helix 24
AC6
B
85 96Right-handed alpha
Helix 25
AC7
B
97 106Right-handed alpha
Helix 26
AC8
B
110 131Right-handed alpha
Helix 27
AC9
B
141 160Right-handed alpha
Helix 28
AD1
B
172 177Right-handed alpha
Helix 29
AD2
B
177 188Right-handed alpha
Helix 30
AD3
B
190 210Right-handed alpha
Helix 31
AD4
B
222 234Right-handed alpha
Helix 32
AD5
B
236 247Right-handed alpha
Helix 33
AD6
B
252 257Right-handed alpha
Helix 34
AD7
B
258 280Right-handed alpha
Helix 35
AD8
B
280 287Right-handed alpha
Helix 36
AD9
B
292 302Right-handed alpha
Helix 37
AE1
B
304 327Right-handed alpha
Helix 38
AE2
B
328 330Right-handed 310
Helix 39
AE3
B
336 362Right-handed alpha
Helix 40
AE4
B
369 373Right-handed 310
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There are 2 sheets in PDB entry 7W5H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
379 382anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 50first strand
Strand 2
B
379 382anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il