Analysis of interatomic Contacts of Structural Units in PDB entry:
7W5L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W5L entry

There is 1 chain in PDB entry 7W5L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7THR 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7W5L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 67Right-handed alpha
Helix 2
AA2
A
74 92Right-handed alpha
Helix 3
AA3
A
92 105Right-handed alpha
Helix 4
AA4
A
107 132Right-handed alpha
Helix 5
AA5
A
164 179Right-handed alpha
Helix 6
AA6
A
192 205Right-handed alpha
Helix 7
AA7
A
221 228Right-handed alpha
Helix 8
AA8
A
276 289Right-handed alpha
Helix 9
AA9
A
306 321Right-handed alpha
Helix 10
AB1
A
340 357Right-handed alpha
Helix 11
AB2
A
388 393Right-handed alpha
Helix 12
AB3
A
407 416Right-handed alpha
Helix 13
AB4
A
430 441Right-handed alpha
Helix 14
AB5
A
470 476Right-handed alpha
Helix 15
AB6
A
477 479Right-handed 310
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There are 6 sheets in PDB entry 7W5L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
42 47parallel
Strand 3
A
31 35anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
24 26anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 137first strand
Strand 2
A
144 152anti-parallel
Strand 3
A
481 489anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
182 186parallel
Strand 3
A
155 159parallel
Strand 4
A
234 237parallel
Strand 5
A
258 260parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 363first strand
Strand 2
A
379 382anti-parallel
Strand 3
A
399 405parallel
Strand 4
A
301 305parallel
Strand 5
A
268 271parallel
Strand 6
A
421 427parallel
Strand 7
A
443 448parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 370first strand
Strand 2
A
373 376anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il