Analysis of interatomic Contacts of Structural Units in PDB entry:
7W5P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W5P entry

There are 10 chains in PDB entry 7W5P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 17	THR 415
B	C 1	C 5
B	G 7	G 12
C	C 1	G 12
D	LEU 17	SER 413
E	C 1	C 5
E	G 7	G 12
F	C 1	G 12
G	LEU 17	THR 415
H	LEU 17	THR 415

There are 70 helices in PDB entry 7W5P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	40	Right-handed alpha
Helix 2	AA2	A	49	54	Right-handed alpha
Helix 3	AA3	A	54	73	Right-handed alpha
Helix 4	AA4	A	81	89	Right-handed alpha
Helix 5	AA5	A	97	108	Right-handed alpha
Helix 6	AA6	A	145	161	Right-handed alpha
Helix 7	AA7	A	165	174	Right-handed alpha
Helix 8	AA8	A	174	179	Right-handed alpha
Helix 9	AA9	A	203	211	Right-handed 310
Helix 10	AB1	A	242	246	Right-handed 310
Helix 11	AB2	A	250	259	Right-handed alpha
Helix 12	AB3	A	259	274	Right-handed alpha
Helix 13	AB4	A	274	291	Right-handed alpha
Helix 14	AB5	A	292	295	Right-handed 310
Helix 15	AB6	A	297	307	Right-handed alpha
Helix 16	AB7	A	353	355	Right-handed 310
Helix 17	AB8	A	393	400	Right-handed alpha
Helix 18	AB9	A	409	415	Right-handed 310
Helix 19	AC1	D	18	40	Right-handed alpha
Helix 20	AC2	D	49	54	Right-handed alpha
Helix 21	AC3	D	54	73	Right-handed alpha
Helix 22	AC4	D	81	89	Right-handed alpha
Helix 23	AC5	D	97	108	Right-handed alpha
Helix 24	AC6	D	111	116	Right-handed alpha
Helix 25	AC7	D	145	162	Right-handed alpha
Helix 26	AC8	D	165	174	Right-handed alpha
Helix 27	AC9	D	203	207	Right-handed 310
Helix 28	AD1	D	242	246	Right-handed 310
Helix 29	AD2	D	250	259	Right-handed alpha
Helix 30	AD3	D	259	274	Right-handed alpha
Helix 31	AD4	D	274	291	Right-handed alpha
Helix 32	AD5	D	292	295	Right-handed 310
Helix 33	AD6	D	297	307	Right-handed alpha
Helix 34	AD7	D	353	356	Right-handed 310
Helix 35	AD8	D	393	400	Right-handed alpha
Helix 36	AD9	D	409	413	Right-handed 310
Helix 37	AE1	G	18	40	Right-handed alpha
Helix 38	AE2	G	49	54	Right-handed alpha
Helix 39	AE3	G	54	73	Right-handed alpha
Helix 40	AE4	G	81	89	Right-handed alpha
Helix 41	AE5	G	97	108	Right-handed alpha
Helix 42	AE6	G	145	162	Right-handed alpha
Helix 43	AE7	G	165	182	Right-handed alpha
Helix 44	AE8	G	203	211	Right-handed 310
Helix 45	AE9	G	242	246	Right-handed 310
Helix 46	AF1	G	250	259	Right-handed alpha
Helix 47	AF2	G	259	274	Right-handed alpha
Helix 48	AF3	G	274	291	Right-handed alpha
Helix 49	AF4	G	292	295	Right-handed 310
Helix 50	AF5	G	297	307	Right-handed alpha
Helix 51	AF6	G	353	356	Right-handed 310
Helix 52	AF7	G	393	401	Right-handed alpha
Helix 53	AF8	G	409	415	Right-handed 310
Helix 54	AF9	H	18	40	Right-handed alpha
Helix 55	AG1	H	49	54	Right-handed alpha
Helix 56	AG2	H	54	73	Right-handed alpha
Helix 57	AG3	H	81	89	Right-handed alpha
Helix 58	AG4	H	97	108	Right-handed alpha
Helix 59	AG5	H	145	162	Right-handed alpha
Helix 60	AG6	H	165	177	Right-handed alpha
Helix 61	AG7	H	203	211	Right-handed 310
Helix 62	AG8	H	242	246	Right-handed 310
Helix 63	AG9	H	250	259	Right-handed alpha
Helix 64	AH1	H	259	274	Right-handed alpha
Helix 65	AH2	H	274	291	Right-handed alpha
Helix 66	AH3	H	292	295	Right-handed 310
Helix 67	AH4	H	297	307	Right-handed alpha
Helix 68	AH5	H	353	356	Right-handed 310
Helix 69	AH6	H	393	400	Right-handed alpha
Helix 70	AH7	H	409	415	Right-handed 310

There are 12 sheets in PDB entry 7W5P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	77	first strand
Strand 2	A	126	129	parallel
Strand 3	A	135	140	anti-parallel
Strand 4	A	366	370	anti-parallel
Strand 5	A	336	344	anti-parallel
Strand 6	A	384	391	anti-parallel
Strand 7	A	314	319	anti-parallel
Strand 8	A	221	225	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	122	first strand
Strand 2	A	357	360	parallel
Strand 3	A	349	352	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	326	first strand
Strand 2	A	376	378	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	77	first strand
Strand 2	D	126	129	parallel
Strand 3	D	135	140	anti-parallel
Strand 4	D	366	370	anti-parallel
Strand 5	D	336	344	anti-parallel
Strand 6	D	384	391	anti-parallel
Strand 7	D	314	319	anti-parallel
Strand 8	D	221	225	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	323	326	first strand
Strand 2	D	376	378	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	349	352	first strand
Strand 2	D	357	360	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	75	77	first strand
Strand 2	G	126	129	parallel
Strand 3	G	135	140	anti-parallel
Strand 4	G	366	370	anti-parallel
Strand 5	G	336	344	anti-parallel
Strand 6	G	384	391	anti-parallel
Strand 7	G	314	319	anti-parallel
Strand 8	G	221	225	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	323	326	first strand
Strand 2	G	376	378	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	349	352	first strand
Strand 2	G	357	360	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	75	77	first strand
Strand 2	H	126	129	parallel
Strand 3	H	135	140	anti-parallel
Strand 4	H	366	370	anti-parallel
Strand 5	H	336	344	anti-parallel
Strand 6	H	384	391	anti-parallel
Strand 7	H	314	319	anti-parallel
Strand 8	H	221	225	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	121	122	first strand
Strand 2	H	357	360	parallel
Strand 3	H	349	352	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	323	326	first strand
Strand 2	H	376	378	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W5P

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W5P