Analysis of interatomic Contacts of Structural Units in PDB entry:
7W61


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W61 entry

There is 1 chain in PDB entry 7W61 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP -1LEU 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 7W61. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 5Right-handed 310
Helix 2
AA2
A
16 29Right-handed alpha
Helix 3
AA3
A
40 46Right-handed alpha
Helix 4
AA4
A
47 50Right-handed 310
Helix 5
AA5
A
65 80Right-handed alpha
Helix 6
AA6
A
107 119Right-handed alpha
Helix 7
AA7
A
119 136Right-handed alpha
Helix 8
AA8
A
147 151Right-handed 310
Helix 9
AA9
A
161 183Right-handed alpha
Helix 10
AB1
A
214 228Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7W61.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 60first strand
Strand 2
A
32 37parallel
Strand 3
A
8 12parallel
Strand 4
A
85 88parallel
Strand 5
A
141 145parallel
Strand 6
A
188 194parallel
Strand 7
A
236 239parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il