Analysis of interatomic Contacts of Structural Units in PDB entry:
7W68

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W68 entry

There are 6 chains in PDB entry 7W68 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 1	MET 698
B	SER 1	PHE 621
C	LEU 1	THR 625
D	ASP 52	LYS 705
E	VAL 1	LEU 770
F	ASP 1	LEU 640

There are141 helices in PDB entry 7W68. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	13	Right-handed alpha
Helix 2	AA2	A	22	32	Right-handed alpha
Helix 3	AA3	A	43	51	Right-handed alpha
Helix 4	AA4	A	51	56	Right-handed alpha
Helix 5	AA5	A	61	81	Right-handed alpha
Helix 6	AA6	A	82	87	Right-handed 310
Helix 7	AA7	A	108	112	Right-handed 310
Helix 8	AA8	A	179	183	Right-handed 310
Helix 9	AA9	A	232	237	Right-handed 310
Helix 10	AB1	A	270	279	Right-handed alpha
Helix 11	AB2	A	282	287	Right-handed alpha
Helix 12	AB3	A	298	311	Right-handed alpha
Helix 13	AB4	A	338	343	Right-handed alpha
Helix 14	AB5	A	344	350	Right-handed alpha
Helix 15	AB6	A	384	389	Right-handed alpha
Helix 16	AB7	A	403	417	Right-handed alpha
Helix 17	AB8	A	453	457	Right-handed 310
Helix 18	AB9	A	460	465	Right-handed alpha
Helix 19	AC1	A	478	497	Right-handed alpha
Helix 20	AC2	A	532	540	Right-handed alpha
Helix 21	AC3	A	549	567	Right-handed alpha
Helix 22	AC4	A	573	592	Right-handed alpha
Helix 23	AC5	A	597	615	Right-handed alpha
Helix 24	AC6	A	619	630	Right-handed alpha
Helix 25	AC7	A	673	681	Right-handed alpha
Helix 26	AC8	A	691	696	Right-handed alpha
Helix 27	AC9	B	17	22	Right-handed alpha
Helix 28	AD1	B	35	55	Right-handed alpha
Helix 29	AD2	B	79	83	Right-handed 310
Helix 30	AD3	B	84	88	Right-handed 310
Helix 31	AD4	B	172	175	Right-handed 310
Helix 32	AD5	B	189	193	Right-handed 310
Helix 33	AD6	B	247	255	Right-handed alpha
Helix 34	AD7	B	261	270	Right-handed alpha
Helix 35	AD8	B	277	289	Right-handed alpha
Helix 36	AD9	B	317	328	Right-handed alpha
Helix 37	AE1	B	363	368	Right-handed alpha
Helix 38	AE2	B	377	381	Right-handed 310
Helix 39	AE3	B	382	396	Right-handed alpha
Helix 40	AE4	B	431	436	Right-handed alpha
Helix 41	AE5	B	441	446	Right-handed alpha
Helix 42	AE6	B	457	470	Right-handed alpha
Helix 43	AE7	B	532	543	Right-handed alpha
Helix 44	AE8	B	550	568	Right-handed alpha
Helix 45	AE9	B	580	599	Right-handed alpha
Helix 46	AF1	B	607	621	Right-handed alpha
Helix 47	AF2	C	13	24	Right-handed alpha
Helix 48	AF3	C	46	53	Right-handed alpha
Helix 49	AF4	C	64	69	Right-handed 310
Helix 50	AF5	C	70	76	Right-handed alpha
Helix 51	AF6	C	80	83	Right-handed 310
Helix 52	AF7	C	84	100	Right-handed alpha
Helix 53	AF8	C	183	188	Right-handed alpha
Helix 54	AF9	C	188	193	Right-handed alpha
Helix 55	AG1	C	293	306	Right-handed alpha
Helix 56	AG2	C	308	317	Right-handed alpha
Helix 57	AG3	C	324	336	Right-handed alpha
Helix 58	AG4	C	366	378	Right-handed alpha
Helix 59	AG5	C	390	394	Right-handed 310
Helix 60	AG6	C	426	430	Right-handed 310
Helix 61	AG7	C	435	442	Right-handed alpha
Helix 62	AG8	C	491	495	Right-handed 310
Helix 63	AG9	C	506	521	Right-handed alpha
Helix 64	AH1	C	534	549	Right-handed alpha
Helix 65	AH2	C	557	571	Right-handed alpha
Helix 66	AH3	C	583	598	Right-handed alpha
Helix 67	AH4	C	609	623	Right-handed alpha
Helix 68	AH5	D	55	62	Right-handed alpha
Helix 69	AH6	D	62	82	Right-handed alpha
Helix 70	AH7	D	88	90	Right-handed 310
Helix 71	AH8	D	91	96	Right-handed alpha
Helix 72	AH9	D	288	299	Right-handed alpha
Helix 73	AI1	D	301	309	Right-handed alpha
Helix 74	AI2	D	317	328	Right-handed alpha
Helix 75	AI3	D	357	367	Right-handed alpha
Helix 76	AI4	D	418	421	Right-handed 310
Helix 77	AI5	D	422	436	Right-handed alpha
Helix 78	AI6	D	480	485	Right-handed 310
Helix 79	AI7	D	528	540	Right-handed alpha
Helix 80	AI8	D	546	563	Right-handed alpha
Helix 81	AI9	D	579	599	Right-handed alpha
Helix 82	AJ1	D	604	624	Right-handed alpha
Helix 83	AJ2	D	638	640	Right-handed 310
Helix 84	AJ3	D	641	651	Right-handed alpha
Helix 85	AJ4	D	664	672	Right-handed alpha
Helix 86	AJ5	D	675	682	Right-handed alpha
Helix 87	AJ6	D	683	686	Right-handed 310
Helix 88	AJ7	D	691	701	Right-handed alpha
Helix 89	AJ8	E	2	17	Right-handed alpha
Helix 90	AJ9	E	26	38	Right-handed alpha
Helix 91	AK1	E	48	77	Right-handed alpha
Helix 92	AK2	E	78	82	Right-handed 310
Helix 93	AK3	E	83	87	Right-handed 310
Helix 94	AK4	E	110	114	Right-handed 310
Helix 95	AK5	E	194	198	Right-handed 310
Helix 96	AK6	E	214	216	Right-handed 310
Helix 97	AK7	E	268	271	Right-handed 310
Helix 98	AK8	E	272	277	Right-handed alpha
Helix 99	AK9	E	311	326	Right-handed alpha
Helix 100	AL1	E	328	338	Right-handed alpha
Helix 101	AL2	E	344	356	Right-handed alpha
Helix 102	AL3	E	385	394	Right-handed alpha
Helix 103	AL4	E	432	436	Right-handed 310
Helix 104	AL5	E	444	448	Right-handed 310
Helix 105	AL6	E	452	463	Right-handed alpha
Helix 106	AL7	E	498	503	Right-handed alpha
Helix 107	AL8	E	506	511	Right-handed alpha
Helix 108	AL9	E	524	540	Right-handed alpha
Helix 109	AM1	E	541	544	Right-handed 310
Helix 110	AM2	E	553	563	Right-handed alpha
Helix 111	AM3	E	573	590	Right-handed alpha
Helix 112	AM4	E	600	619	Right-handed alpha
Helix 113	AM5	E	624	642	Right-handed alpha
Helix 114	AM6	E	706	717	Right-handed alpha
Helix 115	AM7	E	717	723	Right-handed alpha
Helix 116	AM8	E	727	739	Right-handed alpha
Helix 117	AM9	E	746	763	Right-handed alpha
Helix 118	AN1	F	5	17	Right-handed alpha
Helix 119	AN2	F	27	38	Right-handed alpha
Helix 120	AN3	F	48	53	Right-handed alpha
Helix 121	AN4	F	59	65	Right-handed alpha
Helix 122	AN5	F	65	85	Right-handed alpha
Helix 123	AN6	F	137	140	Right-handed 310
Helix 124	AN7	F	144	148	Right-handed 310
Helix 125	AN8	F	219	223	Right-handed 310
Helix 126	AN9	F	256	258	Right-handed 310
Helix 127	AO1	F	327	335	Right-handed alpha
Helix 128	AO2	F	343	356	Right-handed alpha
Helix 129	AO3	F	365	370	Right-handed 310
Helix 130	AO4	F	385	394	Right-handed alpha
Helix 131	AO5	F	406	410	Right-handed 310
Helix 132	AO6	F	428	433	Right-handed alpha
Helix 133	AO7	F	442	446	Right-handed 310
Helix 134	AO8	F	451	458	Right-handed alpha
Helix 135	AO9	F	504	509	Right-handed alpha
Helix 136	AP1	F	522	536	Right-handed alpha
Helix 137	AP2	F	551	564	Right-handed alpha
Helix 138	AP3	F	570	572	Right-handed 310
Helix 139	AP4	F	573	592	Right-handed alpha
Helix 140	AP5	F	598	616	Right-handed alpha
Helix 141	AP6	F	622	637	Right-handed alpha

There are 29 sheets in PDB entry 7W68. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	208	first strand
Strand 2	A	184	189	anti-parallel
Strand 3	A	114	125	anti-parallel
Strand 4	A	221	229	anti-parallel
Strand 5	A	248	253	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	208	first strand
Strand 2	A	184	189	anti-parallel
Strand 3	A	114	125	anti-parallel
Strand 4	A	380	382	anti-parallel
Strand 5	A	369	371	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	355	first strand
Strand 2	A	393	397	parallel
Strand 3	A	435	439	parallel
Strand 4	A	329	331	parallel
Strand 5	A	469	471	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	421	first strand
Strand 2	A	428	431	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	107	first strand
Strand 2	B	161	170	anti-parallel
Strand 3	B	184	188	anti-parallel
Strand 4	B	225	233	parallel
Strand 5	B	201	210	anti-parallel
Strand 6	B	91	97	anti-parallel
Strand 7	B	161	170	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	332	336	first strand
Strand 2	B	371	376	parallel
Strand 3	B	413	419	parallel
Strand 4	B	308	311	parallel
Strand 5	B	449	451	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	401	first strand
Strand 2	B	406	410	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	135	first strand
Strand 2	C	242	246	anti-parallel
Strand 3	C	266	269	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	138	143	first strand
Strand 2	C	203	207	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	156	first strand
Strand 2	C	163	164	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	251	first strand
Strand 2	C	259	263	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	382	383	first strand
Strand 2	C	421	423	parallel
Strand 3	C	463	465	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	399	400	first strand
Strand 2	C	407	408	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	446	449	first strand
Strand 2	C	456	459	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	373	374	first strand
Strand 2	D	412	416	parallel
Strand 3	D	454	458	parallel
Strand 4	D	349	350	parallel
Strand 5	D	487	488	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	437	439	first strand
Strand 2	D	448	450	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	47	first strand
Strand 2	E	97	98	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	137	first strand
Strand 2	E	181	183	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	191	first strand
Strand 2	E	207	212	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	400	401	first strand
Strand 2	E	439	442	parallel
Strand 3	E	481	486	parallel
Strand 4	E	374	379	parallel
Strand 5	E	515	519	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	467	468	first strand
Strand 2	E	473	474	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	43	44	first strand
Strand 2	F	131	132	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	142	143	first strand
Strand 2	F	158	159	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	162	164	first strand
Strand 2	F	224	234	anti-parallel
Strand 3	F	170	178	anti-parallel
Strand 4	F	187	189	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	162	164	first strand
Strand 2	F	224	234	anti-parallel
Strand 3	F	251	254	anti-parallel
Strand 4	F	294	296	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	166	168	first strand
Strand 2	F	422	427	anti-parallel
Strand 3	F	412	413	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	483	484	first strand
Strand 2	F	373	376	parallel
Strand 3	F	513	516	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	397	401	first strand
Strand 2	F	437	441	parallel
Strand 3	F	479	481	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	463	464	first strand
Strand 2	F	473	474	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W68

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W68