Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W6B entry

There is 1 chain in PDB entry 7W6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 41LYS 822
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7W6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 92Right-handed 310
Helix 2
AA2
A
104 115Right-handed alpha
Helix 3
AA3
A
121 128Right-handed alpha
Helix 4
AA4
A
191 201Right-handed alpha
Helix 5
AA5
A
221 235Right-handed alpha
Helix 6
AA6
A
266 269Right-handed 310
Helix 7
AA7
A
277 296Right-handed alpha
Helix 8
AA8
A
297 299Right-handed 310
Helix 9
AA9
A
315 327Right-handed alpha
Helix 10
AB1
A
339 351Right-handed alpha
Helix 11
AB2
A
439 448Right-handed alpha
Helix 12
AB3
A
457 461Right-handed 310
Helix 13
AB4
A
658 660Right-handed 310
Helix 14
AB5
A
680 684Right-handed 310
Helix 15
AB6
A
793 796Right-handed 310
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There are 16 sheets in PDB entry 7W6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 51first strand
Strand 2
A
58 68anti-parallel
Strand 3
A
429 438anti-parallel
Strand 4
A
372 374anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 51first strand
Strand 2
A
58 68anti-parallel
Strand 3
A
429 438anti-parallel
Strand 4
A
383 388anti-parallel
Strand 5
A
391 394anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 189first strand
Strand 2
A
133 139anti-parallel
Strand 3
A
78 85parallel
Strand 4
A
241 248parallel
Strand 5
A
301 307parallel
Strand 6
A
332 337parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
102 103anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 152first strand
Strand 2
A
157 162anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 256first strand
Strand 2
A
262 264anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 406first strand
Strand 2
A
412 417anti-parallel
Strand 3
A
360 368anti-parallel
Strand 4
A
468 476anti-parallel
Strand 5
A
485 488anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 466first strand
Strand 2
A
494 495anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
558 566first strand
Strand 2
A
501 510anti-parallel
Strand 3
A
597 603parallel
Strand 4
A
582 588anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
542 551first strand
Strand 2
A
526 533anti-parallel
Strand 3
A
572 575anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
662 665first strand
Strand 2
A
607 614anti-parallel
Strand 3
A
701 709parallel
Strand 4
A
686 691anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
635 636first strand
Strand 2
A
622 631anti-parallel
Strand 3
A
650 656anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
635 636first strand
Strand 2
A
622 631anti-parallel
Strand 3
A
672 678anti-parallel
Strand 4
A
694 697anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
639 641first strand
Strand 2
A
644 646anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
756 761first strand
Strand 2
A
746 752anti-parallel
Strand 3
A
774 779anti-parallel
Strand 4
A
712 720anti-parallel
Strand 5
A
814 821parallel
Strand 6
A
800 804anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
765 770first strand
Strand 2
A
730 737anti-parallel
Strand 3
A
785 791anti-parallel
Strand 4
A
807 810anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il