Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W6N entry

There are 8 chains in PDB entry 7W6N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 49	MET 227
B	MET 1	THR 487
C	GLY 49	MET 227
D	MET 1	THR 487
E	GLY 49	MET 227
F	MET 1	THR 487
G	GLY 49	MET 227
H	MET 1	THR 487

There are132 helices in PDB entry 7W6N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	55	Right-handed alpha
Helix 2	AA2	A	61	75	Right-handed alpha
Helix 3	AA3	A	81	89	Right-handed alpha
Helix 4	AA4	A	90	93	Right-handed 310
Helix 5	AA5	A	98	110	Right-handed alpha
Helix 6	AA6	A	119	132	Right-handed alpha
Helix 7	AA7	A	133	146	Right-handed alpha
Helix 8	AA8	A	155	170	Right-handed alpha
Helix 9	AA9	A	181	194	Right-handed alpha
Helix 10	AB1	A	202	208	Right-handed alpha
Helix 11	AB2	A	213	220	Right-handed alpha
Helix 12	AB3	B	3	7	Right-handed 310
Helix 13	AB4	B	8	17	Right-handed alpha
Helix 14	AB5	B	55	59	Right-handed alpha
Helix 15	AB6	B	70	75	Right-handed 310
Helix 16	AB7	B	90	100	Right-handed alpha
Helix 17	AB8	B	110	122	Right-handed alpha
Helix 18	AB9	B	124	128	Right-handed 310
Helix 19	AC1	B	129	132	Right-handed 310
Helix 20	AC2	B	133	148	Right-handed alpha
Helix 21	AC3	B	167	174	Right-handed alpha
Helix 22	AC4	B	179	203	Right-handed alpha
Helix 23	AC5	B	217	222	Right-handed alpha
Helix 24	AC6	B	222	247	Right-handed alpha
Helix 25	AC7	B	259	276	Right-handed alpha
Helix 26	AC8	B	282	291	Right-handed alpha
Helix 27	AC9	B	292	302	Right-handed 310
Helix 28	AD1	B	304	317	Right-handed alpha
Helix 29	AD2	B	317	344	Right-handed alpha
Helix 30	AD3	B	357	366	Right-handed alpha
Helix 31	AD4	B	379	396	Right-handed alpha
Helix 32	AD5	B	397	426	Right-handed alpha
Helix 33	AD6	B	472	484	Right-handed alpha
Helix 34	AD7	C	50	55	Right-handed alpha
Helix 35	AD8	C	61	75	Right-handed alpha
Helix 36	AD9	C	81	89	Right-handed alpha
Helix 37	AE1	C	90	93	Right-handed 310
Helix 38	AE2	C	98	110	Right-handed alpha
Helix 39	AE3	C	119	132	Right-handed alpha
Helix 40	AE4	C	133	146	Right-handed alpha
Helix 41	AE5	C	155	170	Right-handed alpha
Helix 42	AE6	C	181	194	Right-handed alpha
Helix 43	AE7	C	202	208	Right-handed alpha
Helix 44	AE8	C	213	220	Right-handed alpha
Helix 45	AE9	D	3	7	Right-handed 310
Helix 46	AF1	D	8	17	Right-handed alpha
Helix 47	AF2	D	55	59	Right-handed alpha
Helix 48	AF3	D	70	75	Right-handed 310
Helix 49	AF4	D	90	100	Right-handed alpha
Helix 50	AF5	D	110	122	Right-handed alpha
Helix 51	AF6	D	124	128	Right-handed 310
Helix 52	AF7	D	129	132	Right-handed 310
Helix 53	AF8	D	133	148	Right-handed alpha
Helix 54	AF9	D	167	174	Right-handed alpha
Helix 55	AG1	D	179	203	Right-handed alpha
Helix 56	AG2	D	217	222	Right-handed alpha
Helix 57	AG3	D	222	247	Right-handed alpha
Helix 58	AG4	D	259	276	Right-handed alpha
Helix 59	AG5	D	282	291	Right-handed alpha
Helix 60	AG6	D	292	302	Right-handed 310
Helix 61	AG7	D	304	317	Right-handed alpha
Helix 62	AG8	D	317	344	Right-handed alpha
Helix 63	AG9	D	357	366	Right-handed alpha
Helix 64	AH1	D	379	396	Right-handed alpha
Helix 65	AH2	D	397	426	Right-handed alpha
Helix 66	AH3	D	472	484	Right-handed alpha
Helix 67	AH4	E	50	55	Right-handed alpha
Helix 68	AH5	E	61	75	Right-handed alpha
Helix 69	AH6	E	81	89	Right-handed alpha
Helix 70	AH7	E	90	93	Right-handed 310
Helix 71	AH8	E	98	110	Right-handed alpha
Helix 72	AH9	E	119	132	Right-handed alpha
Helix 73	AI1	E	133	146	Right-handed alpha
Helix 74	AI2	E	155	170	Right-handed alpha
Helix 75	AI3	E	181	194	Right-handed alpha
Helix 76	AI4	E	202	208	Right-handed alpha
Helix 77	AI5	E	213	220	Right-handed alpha
Helix 78	AI6	F	3	7	Right-handed 310
Helix 79	AI7	F	8	17	Right-handed alpha
Helix 80	AI8	F	55	59	Right-handed alpha
Helix 81	AI9	F	70	75	Right-handed 310
Helix 82	AJ1	F	90	100	Right-handed alpha
Helix 83	AJ2	F	110	122	Right-handed alpha
Helix 84	AJ3	F	124	128	Right-handed 310
Helix 85	AJ4	F	129	132	Right-handed 310
Helix 86	AJ5	F	133	148	Right-handed alpha
Helix 87	AJ6	F	167	174	Right-handed alpha
Helix 88	AJ7	F	179	203	Right-handed alpha
Helix 89	AJ8	F	217	222	Right-handed alpha
Helix 90	AJ9	F	222	247	Right-handed alpha
Helix 91	AK1	F	259	276	Right-handed alpha
Helix 92	AK2	F	282	291	Right-handed alpha
Helix 93	AK3	F	292	302	Right-handed 310
Helix 94	AK4	F	304	317	Right-handed alpha
Helix 95	AK5	F	317	344	Right-handed alpha
Helix 96	AK6	F	357	366	Right-handed alpha
Helix 97	AK7	F	379	396	Right-handed alpha
Helix 98	AK8	F	397	426	Right-handed alpha
Helix 99	AK9	F	472	484	Right-handed alpha
Helix 100	AL1	G	50	55	Right-handed alpha
Helix 101	AL2	G	61	75	Right-handed alpha
Helix 102	AL3	G	81	89	Right-handed alpha
Helix 103	AL4	G	90	93	Right-handed 310
Helix 104	AL5	G	98	110	Right-handed alpha
Helix 105	AL6	G	119	132	Right-handed alpha
Helix 106	AL7	G	133	146	Right-handed alpha
Helix 107	AL8	G	155	170	Right-handed alpha
Helix 108	AL9	G	181	194	Right-handed alpha
Helix 109	AM1	G	202	208	Right-handed alpha
Helix 110	AM2	G	213	220	Right-handed alpha
Helix 111	AM3	H	3	7	Right-handed 310
Helix 112	AM4	H	8	17	Right-handed alpha
Helix 113	AM5	H	55	59	Right-handed alpha
Helix 114	AM6	H	70	75	Right-handed 310
Helix 115	AM7	H	90	100	Right-handed alpha
Helix 116	AM8	H	110	122	Right-handed alpha
Helix 117	AM9	H	124	128	Right-handed 310
Helix 118	AN1	H	129	132	Right-handed 310
Helix 119	AN2	H	133	148	Right-handed alpha
Helix 120	AN3	H	167	174	Right-handed alpha
Helix 121	AN4	H	179	203	Right-handed alpha
Helix 122	AN5	H	217	222	Right-handed alpha
Helix 123	AN6	H	222	247	Right-handed alpha
Helix 124	AN7	H	259	276	Right-handed alpha
Helix 125	AN8	H	282	291	Right-handed alpha
Helix 126	AN9	H	292	302	Right-handed 310
Helix 127	AO1	H	304	317	Right-handed alpha
Helix 128	AO2	H	317	344	Right-handed alpha
Helix 129	AO3	H	357	366	Right-handed alpha
Helix 130	AO4	H	379	396	Right-handed alpha
Helix 131	AO5	H	397	426	Right-handed alpha
Helix 132	AO6	H	472	484	Right-handed alpha

There are 8 sheets in PDB entry 7W6N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	154	first strand
Strand 2	A	200	201	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	54	first strand
Strand 2	B	41	46	anti-parallel
Strand 3	B	82	84	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	154	first strand
Strand 2	C	200	201	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	54	first strand
Strand 2	D	41	46	anti-parallel
Strand 3	D	82	84	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	153	154	first strand
Strand 2	E	200	201	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	49	54	first strand
Strand 2	F	41	46	anti-parallel
Strand 3	F	82	84	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	153	154	first strand
Strand 2	G	200	201	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	49	54	first strand
Strand 2	H	41	46	anti-parallel
Strand 3	H	82	84	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W6N

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6N