Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W6P entry

There are 5 chains in PDB entry 7W6P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 4	TYR 354
B	GLN 6	ASN 340
G	ILE 9	ARG 62
H	ASP 1	LYS 236
R	GLN 46	CYS 457

There are 22 helices in PDB entry 7W6P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	30	Right-handed alpha
Helix 2	AA2	A	45	54	Right-handed alpha
Helix 3	AA3	A	208	214	Right-handed alpha
Helix 4	AA4	A	215	217	Right-handed 310
Helix 5	AA5	A	242	256	Right-handed alpha
Helix 6	AA6	A	296	310	Right-handed alpha
Helix 7	AA7	A	330	352	Right-handed alpha
Helix 8	AA8	B	7	25	Right-handed alpha
Helix 9	AA9	G	10	24	Right-handed alpha
Helix 10	AB1	G	29	44	Right-handed alpha
Helix 11	AB2	H	28	32	Right-handed 310
Helix 12	AB3	R	47	74	Right-handed alpha
Helix 13	AB4	R	81	83	Right-handed 310
Helix 14	AB5	R	84	108	Right-handed alpha
Helix 15	AB6	R	117	151	Right-handed alpha
Helix 16	AB7	R	152	160	Right-handed alpha
Helix 17	AB8	R	161	179	Right-handed alpha
Helix 18	AB9	R	210	220	Right-handed alpha
Helix 19	AC1	R	220	242	Right-handed alpha
Helix 20	AC2	R	380	412	Right-handed alpha
Helix 21	AC3	R	422	441	Right-handed alpha
Helix 22	AC4	R	445	457	Right-handed alpha

There are 12 sheets in PDB entry 7W6P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	192	first strand
Strand 2	A	195	202	anti-parallel
Strand 3	A	34	40	parallel
Strand 4	A	221	227	parallel
Strand 5	A	264	270	parallel
Strand 6	A	319	323	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	51	first strand
Strand 2	B	336	340	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	105	first strand
Strand 2	B	111	114	anti-parallel
Strand 3	B	120	125	anti-parallel
Strand 4	B	134	140	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	157	161	anti-parallel
Strand 3	B	165	166	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	192	first strand
Strand 2	B	198	201	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	217	222	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	234	first strand
Strand 2	B	241	243	anti-parallel
Strand 3	B	249	253	anti-parallel
Strand 4	B	260	265	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	276	first strand
Strand 2	B	287	288	anti-parallel
Strand 3	B	294	295	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	17	24	anti-parallel
Strand 3	H	78	84	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	46	51	anti-parallel
Strand 3	H	33	38	anti-parallel
Strand 4	H	92	99	anti-parallel
Strand 5	H	111	117	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	128	129	first strand
Strand 2	H	146	149	anti-parallel
Strand 3	H	199	202	anti-parallel
Strand 4	H	193	195	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	182	183	first strand
Strand 2	H	174	178	anti-parallel
Strand 3	H	162	167	anti-parallel
Strand 4	H	214	219	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W6P

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6P